Gene Hlac_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0230 
Symbol 
ID7402159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp249038 
End bp250108 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content76% 
IMG OID643707293 
Producthypothetical protein 
Protein accessionYP_002564905 
Protein GI222478668 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR00303] conserved hypothetical protein TIGR00303 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.249399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.194869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG TGACCCTCGC GGTCGTCGCG GGGACGACTG CAACCGCCGC GATCGACGGG 
ATCAGCGCCG CGGGCGCGGA TCCGGAACTC CGGAAACACA CCCCGAGCGC CGACATTGAG
ATCGTCGCCG ACGGGCGGCC CGCACCCGAC TCGGTGGTCC CAGTCAGCCC CTCGGGCTGT
CCGACCCCCG CGGTCGTCAC CCGAGCCGTG CGCGAGCTCG TCGGGTTCGA GTTCGTCGGG
GTCGACGCCG GCCTCGCGGT CCCGACGGCC CCGACGGGGG CGCAGGTCCT CGACGCGGGT
GCCGCGCCCG GCGGCGACGT GCGCGACCCG GAGCCCGTCC CGGACGCCGC GGCGATCTTC
GAGGCGGCGC GCGGACTGGT GCCGGAGATA GTGGAGAGTC GGACGAACGC GTCCGACGGC
GACGATGTCG ACGCCGACGA CGATCGCGAA CTCCTCGTCG CCGAGACGAT CCCCGGCGGC
ACGACGACCG CGCTCGGCGT CCTCACCGCG CTCGGCGAGC GCCCGGCCGT CTCTTCGTCG
CTGCCGGCGA ACCCCCTTGG AACCAAGCGA GCGGTCGTCG ACGAGGGGCT GGCCGCCAGC
GAGATCGCCG CTGGTGACGC GGCCGACGAC CCGCTCGACG CGCTCCGGCT GATGGGCGAC
CCCGTGCTCG CCGCGGCCGC CGGCCTCGTG GTCGGCGCGG TCGAGCGCGG CGTGCCGGTC
ACGCTCGCGG GCGGCACCCA AATGGCGACG GTCGCCGCGC TCGCCCGGCA CGCGGGCGTG
GAGGGCCGAC TCCCGCTCGC GACGACCTCG TTCGTCGCCG ACGACCCCTC CGCGGACGTG
GGCGCGCTCG CGGACGATCT CGGGCTGACG CTCGCCGCGA CCGACCCGGC GTTCGGCGAG
AGCGACCACC CGGCGATGGC GGCGTACGCC CGCGGCGAGG CGAAGGAGGG CGTCGGGATG
GGCGGCGCGT TGGCGCTCTC CGAGCGCGCC GGCGTCCCCG CGGGCGACGT GCGCGACCGG
GTCGCTGCAC TCACCGACCG CCTGCTGGCC GAGCGGGAGT CCCCGTCATG A
 
Protein sequence
MTDVTLAVVA GTTATAAIDG ISAAGADPEL RKHTPSADIE IVADGRPAPD SVVPVSPSGC 
PTPAVVTRAV RELVGFEFVG VDAGLAVPTA PTGAQVLDAG AAPGGDVRDP EPVPDAAAIF
EAARGLVPEI VESRTNASDG DDVDADDDRE LLVAETIPGG TTTALGVLTA LGERPAVSSS
LPANPLGTKR AVVDEGLAAS EIAAGDAADD PLDALRLMGD PVLAAAAGLV VGAVERGVPV
TLAGGTQMAT VAALARHAGV EGRLPLATTS FVADDPSADV GALADDLGLT LAATDPAFGE
SDHPAMAAYA RGEAKEGVGM GGALALSERA GVPAGDVRDR VAALTDRLLA ERESPS