Gene Hlac_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0187 
Symbol 
ID7402116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp201550 
End bp202725 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content68% 
IMG OID643707250 
Productphosphoesterase RecJ domain protein 
Protein accessionYP_002564862 
Protein GI222478625 
COG category[R] General function prediction only 
COG ID[COG0618] Exopolyphosphatase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCTC TGAGCGTGAC CGACGACCGA CTTTCGCAGG CGGAGGCGAT GGCTCGAGAG 
AGCCCGGAGT TCGTCGTCGC GGCCGCGGTC GTCGCGATCG TCGCGATCGT CGGCGCGTAC
GTGCTGTTCC GCGTTCGCAG GACGCCCGGC GTTAAGTTCC ACCGCCTGTT GGCTGAGCGC
GATGAGATCG CGGTGCTGAT GCACCCGAAC CCGGATCCGG ACGCGATGTC GGCGGCGCTC
GGCGTCGCCT CGCTCGCGGA GCAGCTCGAC GTCGACGCGA CGGTACAGTA CCCCGGACAA
ATCCGTCATC AGGAGAACCG GGCGTTCCGC ACGGTGCTTG ACTTGGAGCT GGACCCGATC
GAACACGTGA GCGATCTGGC CGCCGAGTCC ATCGTGCTAG TCGATCACAA CGAGCCGCGG
GGGTTCGCCG GTGCCGACGG CGTGCTTCCG CTCGCTGTCG TCGACCACCA TCCCGGTGAT
GGCGCCGGCG AGGCGTTCAC TGACGTACGA ACCGACTACG GCGCGACGGC CTCGGTAGTT
GCGGAGTACT TCCAGCAAAA CGACGCGACA CCGGTGCCGC CGGACAAGCA CGCAAGCGAG
ACGGACAGCG ACCTCACGCT CCCCACCGAC ACGGCGACCG GGCTCTTGTA CGGGATTCTC
ACCGACACCA AACATCTCAC GGTCGGCGCG AGCGAGTCCG ACTTCGCGGC CGCGGCGTAC
GTGTACCCCG GCGTCGATCA GGACCGGCTC GACCGGATCG CCAACCCGGC GGTCGATGCG
GAGGTGCTGG AGGTGAAAGC GCGGGCCATC GCGGGCCGCC AGATCGAGGG GTCGTTCGCG
GTCGCCGACG TCGGGGGCGT GAACAACGTC GACGCGATCC CGCAGGCAGC CGACGAGCTG
ATCCAACTGG AGGGAGTCAG TGCCGTCGTG GTCATCGGAG AGCGCGACGG GACGGTTCAT
CTCTCCGGCC GGTCACGGGA CGACCGCGTC CACATGGGCA ACGCCATCGG ATCGGTCCTG
TCCGACCTCG ACAACGGCAA CGGCGGCGGC CACTCGCGGA TGGGCGGCGG AACGGTCGCT
CCGACGATCG ATCCGGCGGG TGACGAGGAA CCGGAGACCG TGGACCGCGA CGCGCTCACA
GACGACCTGT TCCGTGCGCT GGCGGGCGAC GTGTAA
 
Protein sequence
MWSLSVTDDR LSQAEAMARE SPEFVVAAAV VAIVAIVGAY VLFRVRRTPG VKFHRLLAER 
DEIAVLMHPN PDPDAMSAAL GVASLAEQLD VDATVQYPGQ IRHQENRAFR TVLDLELDPI
EHVSDLAAES IVLVDHNEPR GFAGADGVLP LAVVDHHPGD GAGEAFTDVR TDYGATASVV
AEYFQQNDAT PVPPDKHASE TDSDLTLPTD TATGLLYGIL TDTKHLTVGA SESDFAAAAY
VYPGVDQDRL DRIANPAVDA EVLEVKARAI AGRQIEGSFA VADVGGVNNV DAIPQAADEL
IQLEGVSAVV VIGERDGTVH LSGRSRDDRV HMGNAIGSVL SDLDNGNGGG HSRMGGGTVA
PTIDPAGDEE PETVDRDALT DDLFRALAGD V