Gene Hlac_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0171 
Symbol 
ID7402100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp185202 
End bp185642 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content65% 
IMG OID643707234 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_002564846 
Protein GI222478609 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACTG CAGACCAGTA CCTCAAGACG ATATACGTCG TACAGAAGCA GGAAGACGGT 
CCCGCCTCGA CCGGGTCGGT CGCCGACGCC CTCGGCGTCA GTCCCGCGAG CGCCAACGAG
ATGATCGGGA AGCTCGAAGA CCTCGGGCTC GCTGAACACG AGAAGTACAA GGGCGTCCAG
CTCACCGACG ACGGGATCGT GCGGGCGCGC GACGCGCTCC AGACCTACTG TATCATCGAA
CGCTTCCTCG CGAACGTGCT CGCCGTCGAA GACTTCCGCG AGGAGGCCCA CGAGCTGGAG
GCGGTTATCG ACGACACCGT CGCCGAGCGG CTCGACACGA TTATTGATCG GCAGCCGGAG
TGTCCGGACT GCTTCGACCC CGAGACGGAC GCCTGCGCGT GTCTGGAGAT CGCGGCGACG
CCCATCGAGC CGGAGCAGTA G
 
Protein sequence
MNTADQYLKT IYVVQKQEDG PASTGSVADA LGVSPASANE MIGKLEDLGL AEHEKYKGVQ 
LTDDGIVRAR DALQTYCIIE RFLANVLAVE DFREEAHELE AVIDDTVAER LDTIIDRQPE
CPDCFDPETD ACACLEIAAT PIEPEQ