Gene Hlac_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0169 
SymbolargS 
ID7402098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp181632 
End bp183440 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content69% 
IMG OID643707232 
Productarginyl-tRNA synthetase 
Protein accessionYP_002564844 
Protein GI222478607 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGGC AGTTCCGGTC GGAGGTGGCC GACGCGCTCG GCGACGCGCT CGCCTCGCTG 
GACCTCCCGA CCGACGACCT CGGCATCGAA CGCCCGCCCG ACGACATGGA CGCGACGCTC
GCCTCCAGCG TCGCCTTTCG GCTCGCGGGC GAGGTCGGCG ACGCGCCGCC GAACGTGGCC
GCGACGGTCG CGGACGCGGT CGACGTCGAC GGGTACGACT ACTTGGCTGC GGTCGACACC
GCCGGCCCGT ACGTCAACTT CCACCCCGGC GAGCGCTACT TCGTCGACAC GCTCGACGCG
TCCGCGGTCG ACTCGGGCTA CGGCGCACTT CCCGACCGCG ACACCTCTGT CGTCGTCGAG
CACACGAGCG CGAACCCGAC CGGTCCGGTC CACGTCGGTC GCGCGCGCAA CCCCATCGTC
GGCGACGCCG TCGCGAACCT CTTGGAGTAC GCCGGCTACG ACGTGGACCG CCACTACTAC
GTCAACGACG CCGGCCGCCA GATGGCGGTG TTCACGTGGG CGTACGAGCG GTTCGACGAG
TCGGACTTAG CGGGAGAGCC CGCCCGCGCC CGCGCCGAGT ACGACCTCGT CCGGTACTAC
CGCAAGGGGA ACGCGTACCT GGAGGAGGCC GATCCCGAGG CCGTCGAGGC CGCCGAGGAG
GAGATCGCCG CGATCCTGCA AGGGCTCGAA GCGGGCGACG AGGAGACGTA CGAGCGCGTC
GGTGAAGTCG TCGACACCGT CCTCGGCGGG ATGAAGGAGT GTCTCGCCCG CCTGCCCGCG
GAGTTCGACG AATTCGTCAA GGAGACGCGG TTCATGCGCG ACGGCTCCAC CGACGACATC
GCCGCGCGAC TCAAGGAGAC CGATCACGCC GTCTACGAGG AGGACGCGTG GCAACTGGAA
CTCGACGACT GGGGGATCGA CAAGAACCTC GTCTTCCTGC GCTCCGACGA TACCAGCCTC
TACACCACCC GCGATCTGGC CCACCACGAG TGGAAGTTCG ACAACTACGA CCGCGCGGTC
ACCGTACTCG GCGAGGACCA CAAGCTGCAG GCCGACCAGC TCGACGCGAC CCTCGAACTG
CTCGGTAACG ACATCGACCG GCTCGGCCAC GTCATCTACT CGTACGTCAA CCTCCCGGAC
GGGAAGATGT CTACCCGGCG GGGTACCGGC GTGATGCTCG ACGATTTGCT CGACGAGGCG
ATCGACCGCG CCCGCGAGGC GGTCGAGACC CGGATGGACG ACCGGATCCG CGACGACGAC
CTCACCGAGG AGGACGTGGA GCGCATCGCC CACGAGGTCG GGATCGGTGC GGTCCGGTAC
GACATCGTCT CGAAACAGCC CGCAAAGGCG ATCACCTTCG AGTGGGAGGA CGCGCTCGAC
TTCGAGGGGC AGTCCGCCCC GTTCGTCCAG TACGTCCACG CGCGCTGTTG CGGAATCTTA
GACGAGGCGG CCGATGCCGG GATCGAGGTG CCGGGCGTGA CGGCGGACTC CGAGGGAGTC
GTCGATGTCG GCGCCCTCGA CGTCGACGCC ACGGTCTTCG AGACCGACGC GGCGCGCGAC
CTCCTCCGCG AGGTCGCCCG GTTCCCGGCC GCGATCGAGT CGGCGGCGGA CGACCTTGAA
CCGCACACGA TCGCCACGTT CACCCGCGAG TTCGCCGACG CGTACAACGC CTTCTACCGG
GAGTGTCCGG TGGTGACCTC CGACGATGAG GAGCTTCGGG CCGCCCGCGT CGCCCTCGTC
GCGGCCGCGA AGCACACGAT GGCGAACGCG CTCGACGTGC TCGGGGTCGA AGCGCCCGAG
TCGATGTAG
 
Protein sequence
MFRQFRSEVA DALGDALASL DLPTDDLGIE RPPDDMDATL ASSVAFRLAG EVGDAPPNVA 
ATVADAVDVD GYDYLAAVDT AGPYVNFHPG ERYFVDTLDA SAVDSGYGAL PDRDTSVVVE
HTSANPTGPV HVGRARNPIV GDAVANLLEY AGYDVDRHYY VNDAGRQMAV FTWAYERFDE
SDLAGEPARA RAEYDLVRYY RKGNAYLEEA DPEAVEAAEE EIAAILQGLE AGDEETYERV
GEVVDTVLGG MKECLARLPA EFDEFVKETR FMRDGSTDDI AARLKETDHA VYEEDAWQLE
LDDWGIDKNL VFLRSDDTSL YTTRDLAHHE WKFDNYDRAV TVLGEDHKLQ ADQLDATLEL
LGNDIDRLGH VIYSYVNLPD GKMSTRRGTG VMLDDLLDEA IDRAREAVET RMDDRIRDDD
LTEEDVERIA HEVGIGAVRY DIVSKQPAKA ITFEWEDALD FEGQSAPFVQ YVHARCCGIL
DEAADAGIEV PGVTADSEGV VDVGALDVDA TVFETDAARD LLREVARFPA AIESAADDLE
PHTIATFTRE FADAYNAFYR ECPVVTSDDE ELRAARVALV AAAKHTMANA LDVLGVEAPE
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