| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0119 |
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| Symbol | |
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| ID | 7401640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 123768 |
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| End bp | 126563 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643707183 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_002564795 |
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| Protein GI | 222478558 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.893903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACGG GGATCGTCGG GGAGTTCCTC GACCTCAAGG CCGAGACCGA CGCGGACATC
CTCGCCATGC AGTGCGGCGA CTTCTACGAG TTCTTCGCGG ACGACGCCGA GCTGGTCGCC
GACGAGCTGG ACCTGACCGT CTCACAGAAG TCCTCGCACG GCTCGTCGTA CCCGATGGCG
GGCGTGCCGC TCTCGGAGCT GACCCCGTAC GTGAAGGCGC TCGTCGAGCG CGGCTACCGG
GTCGCCGTCG CCGACCAGTA CGAGACCGAG GACGGCCACG CCCGGGAGAT TACCCGCGTC
GTCACGCCTG GGACGCTCCT CGAAACCGCC GACGACGACG CGCGGTACCT CGCGGCGATC
GTCCGCGAGG GCGACGACGC GGACGGCCCC TACGGGCTCG CGCTCGCCGA CGTGACCACG
GGCCGGTTCC TCGTCACCGA AGTCGACGAC GAGGGCGACC TCCGCGCGGA GCTGTACCGC
TTCGACCCCG CCGAGGTGCT CCCGGGACCG CGCGTCCGCA ACGACGACCG ACTGCTCGGA
GCGGTCCGAG AGGACCTCTC GGGGTCGGTT TCCGTCTTCG ACGCGGAGGC GTTCGCGCCG
GGACGCGCGA AACACGCGGT CCGCGAGCAG TTCGGGCGGG AGACCGCCGA CAGCGTCGGC
ATCGACTCCG AACTGGCGCT GCGCGCGGCG GGAGCCGTCC TCGGCTACGT CGAGGAAACC
GGCGCCGGCG TGTTGGCATC GATCACCCGT CTCACGGCCT ACGGCGACGG CGACCACGTC
GCCGTCGACG CCACGACCCA ACGCAACCTC GAACTCACCG AGACGATGCG CGGCGACGCC
GACGGCTCGC TGTTCGAGAC GGTCGATCAC ACCGTCACCG CCGCCGGCGG CCGCCTCCTC
CGAGAGTGGA TCACCCGCCC GCGCCGGGAC CGCGAGGAAC TGAACCGCCG GCTCGACGCG
GTGGAGGCGC TCGCGTCGGC AGCGCTCGCG CGCGACCGCC TGCGAGAGAC GCTCGGCGAC
GCGTACGATC TCGAACGGCT CGCGGCGCGG GCGACTAGCG GGAGCGCGGG CGCGCGGGAA
CTCCTTTCGG TGCGGGACTC GCTGGCGCTG GTGCCCGCGC TCGCCGACGC CGTGTCCGGG
ACCGCGCTCG CGGACTCCCC GGTCGCAGCG GTGCTGGAGC GAATCGACCG CGAGCGCGCC
GCGACCCTCC ACGACGAACT CGCGGACGCG CTCGCGGAGG ACCCGCCGAA GACGAAGACG
CAGGGCGGGC TACTCAGGGT GGGATACGAC GGCGAGCTCG ACGAGCTGAT CGCGCGCCAC
GAGAAGGCGA ACGAGTGGCT CGATAGGCTC GCAGAGCGCG AAAAGCGGCA GTACGGGTTG
AGTCACGTCA CCGTCGACCG CAACAAGACG GACGGTTACT ACATCCAGGT CGGCAAATCC
GCGGCCGACG GGGTTCCCGA GCACTACCGC GAGATCAAGA CGCTGAAGAA CTCGAAGCGG
TTCGTCACCG ACGAACTGGA AGAGCGGGAA CGCGAGGTGC TCCGGTTGGA GGAGGCCCGG
GGCGAGCTGG AGTACGAGCT GTTCGAGGAG CTCCGAGAGC GGGTCGCCGC CGACGCCGAA
CTCTTACAGG ACGTGGGGCG AGCGGTCGCC GAGATCGACG CGCTCGCGTC GCTGGCGACC
CACGCCGCCG GCAACGACTG GACGCGACCC GAACTCGCCG ACGAGCGCCG GCTCGACGTC
GAGGCCGGGC GCCACCCGGT CGTCGAGCGG ACGACCGATT TCGTGCCGAA CGATCTCCGG
CTCGACGGGG AGCGCGGCTT CCTCATCGTC ACCGGGCCGA ACATGAGCGG GAAATCGACG
TATATGCGGC AGGCGGCGCT GATCCAGCTG CTCGCGCAGG CGGGGTCGTT CGTCCCCGCG
CGGACGGCGA CGGTCGGGCT CGTCGACGGA ATCTACACCC GCGTCGGCGC GCTCGACGAG
CTGGCACAGG GGCGCTCCAC GTTCATGGTG GAGATGCAGG AGCTGTCGAA CATCCTCCAC
TCGGCGACCG CCGACTCGAT CGTCATCCTC GACGAGGTCG GCCGCGGCAC CGCCACCTAC
GACGGCATCT CCATCGCGTG GGCCGCGACC GAGTATTTAC ATAACGAGGT GCGCGCGCGG
ACCCTCTTCG CCACGCACTA CCACGAGCTG ACGACGCTGG CAGACCACCT CCCGCGCGTG
GAGAACGTCC ACGTCGCCGT CGACAAGCGC GACGGCGAGG TGACGTTCCT CCGGACCGTT
CGCGACGGCC CGACAAATCG GTCGTACGGG GTCCACGTCG CCGACCTCGC GGGCGTTCCG
GCTCCAGTCG TCTCCCGCGC CGGGACGGTG CTCGACCGGC TTCGCGAGGA GAAGGCGATC
GAGGCGAAGG GCGGAGCGCG GGGCGGAGGG GGCGAACGCG GAGGCTTCAC CGGCACCGCC
GACGGCGACA CGAAACAGGT CGTTTTCGAC CTCTCGTCCG GGTCGTTCTC TGAAAGCGAC
GACGCGGAGT CGACCGCGGC CGGCGCCCCC GGCTCCGGAG GAGGTCGAAA CGGGGCGACT
CCGGGGTCGG CATCGGACGG CGCCAGTGGG TCCGCGGGGA CCGCAGAGAC CGCAGGAGCC
GCAGAGACCG CTGAAAGCGC GGAGACCGAC CGGTTCGATC CCGAGACCCG CGCCGTGATC
GAGGAACTGG CCGACGTCGA TGTCGCGGAG ACCGCGCCGG TGGAGTTGCT GTCTCGGGTT
CAAGAGTGGC AAGAGCGGCT CGACGAGAAC CGCTGA
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| Protein sequence | MPTGIVGEFL DLKAETDADI LAMQCGDFYE FFADDAELVA DELDLTVSQK SSHGSSYPMA
GVPLSELTPY VKALVERGYR VAVADQYETE DGHAREITRV VTPGTLLETA DDDARYLAAI
VREGDDADGP YGLALADVTT GRFLVTEVDD EGDLRAELYR FDPAEVLPGP RVRNDDRLLG
AVREDLSGSV SVFDAEAFAP GRAKHAVREQ FGRETADSVG IDSELALRAA GAVLGYVEET
GAGVLASITR LTAYGDGDHV AVDATTQRNL ELTETMRGDA DGSLFETVDH TVTAAGGRLL
REWITRPRRD REELNRRLDA VEALASAALA RDRLRETLGD AYDLERLAAR ATSGSAGARE
LLSVRDSLAL VPALADAVSG TALADSPVAA VLERIDRERA ATLHDELADA LAEDPPKTKT
QGGLLRVGYD GELDELIARH EKANEWLDRL AEREKRQYGL SHVTVDRNKT DGYYIQVGKS
AADGVPEHYR EIKTLKNSKR FVTDELEERE REVLRLEEAR GELEYELFEE LRERVAADAE
LLQDVGRAVA EIDALASLAT HAAGNDWTRP ELADERRLDV EAGRHPVVER TTDFVPNDLR
LDGERGFLIV TGPNMSGKST YMRQAALIQL LAQAGSFVPA RTATVGLVDG IYTRVGALDE
LAQGRSTFMV EMQELSNILH SATADSIVIL DEVGRGTATY DGISIAWAAT EYLHNEVRAR
TLFATHYHEL TTLADHLPRV ENVHVAVDKR DGEVTFLRTV RDGPTNRSYG VHVADLAGVP
APVVSRAGTV LDRLREEKAI EAKGGARGGG GERGGFTGTA DGDTKQVVFD LSSGSFSESD
DAESTAAGAP GSGGGRNGAT PGSASDGASG SAGTAETAGA AETAESAETD RFDPETRAVI
EELADVDVAE TAPVELLSRV QEWQERLDEN R
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