Gene Hlac_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0110 
Symbol 
ID7401630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp115846 
End bp116277 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content67% 
IMG OID643707173 
ProductTranscription factor CBF/NF-Y/histone domain protein 
Protein accessionYP_002564786 
Protein GI222478549 
COG category[B] Chromatin structure and dynamics 
COG ID[COG2036] Histones H3 and H4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.835787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCG AGTTGCCGTT CGCGCCGGTC GACGGGATCA TCCGGCGGAA CGCCGGGGAC 
CTCCGTGTGA GTGCGGACGC CGCCGAGGAG TTGGCTCGCC GGATCCAAGC GCACGGCGCG
GAGCTGGCGA TCGACGCGGC CGAACGGGCA ACCGAGGACG GACGAAAGAC GCTGATGGCG
TCCGATTTCG GCGTCGAACA GGTGATCAGT CGCGAGGATC TCATCCTGCC CGTCGCGCCC
ATCGACCGGA TCGCGCGGCT CCGGATAGAC GATCGATACC GAGTGGGCGT CGACGCGCGC
ATCGCGTTGG CCGATATCCT GGAGGATTAC GCCGACAACG TCGCGAGCGC GGCCGCGACG
CTCGCACGCC ACGCCGACAG ACGGACCGTA CAGGCCGAGG ACATCGAGAC GTACTTCGCC
TTGTTCGAGT AG
 
Protein sequence
MSVELPFAPV DGIIRRNAGD LRVSADAAEE LARRIQAHGA ELAIDAAERA TEDGRKTLMA 
SDFGVEQVIS REDLILPVAP IDRIARLRID DRYRVGVDAR IALADILEDY ADNVASAAAT
LARHADRRTV QAEDIETYFA LFE