Gene Hlac_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0103 
Symbol 
ID7401621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp105993 
End bp106412 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content70% 
IMG OID643707164 
Producttranscription elongation factor NusA-like protein 
Protein accessionYP_002564779 
Protein GI222478542 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01952] NusA family KH domain protein, archaeal 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTCG AGCTCTCCGA CGAGGCGCGG CGCTACATCG GTCGCTTCGA CGAGCTGACC 
GGGGTCGCGC CAAAGGACTG CCTCGTGGAG GGCGACCGGC TCGTGTTCCT CGTGCCGGCC
GGCAAGATGG CAGCCGCGAT CGGACAGGCC GGAGAGACCG TCGAGGAGGC GGAACGGCGG
CTCGCCAAGT CCATCGAACT GGTCGAGGAC GCGGACACGC CGGAGGCGTT CGTCGCGAGT
GCGCTCGCGC CCGCGGCGGT CAACGCCGTG ACGATCTCCG AGCAGAACGA CCGGGTCGCG
TACGTCGAGG TGCCGGAGCC GGACCGCGGT GTCGCCATCG GCGCGGACGG CGCCAACATC
GAGACGGCGC GGACGCTGGC GAAGCGGCAC TACGACATCG ACGACATCCA GTTGACCTGA
 
Protein sequence
MYVELSDEAR RYIGRFDELT GVAPKDCLVE GDRLVFLVPA GKMAAAIGQA GETVEEAERR 
LAKSIELVED ADTPEAFVAS ALAPAAVNAV TISEQNDRVA YVEVPEPDRG VAIGADGANI
ETARTLAKRH YDIDDIQLT