| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0048 |
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| Symbol | |
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| ID | 7401401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 49494 |
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| End bp | 49688 |
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| Gene Length | 195 bp |
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| Protein Length | 64 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643707107 |
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| Product | cold-shock DNA-binding domain protein |
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| Protein accession | YP_002564724 |
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| Protein GI | 222478487 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.152198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00109076 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGACCG GAAAGGTTGA TTTCTTCAAC GACACTGGCG GCTACGGATT TATTGAGACT
GACGACGCTG ACGACGACGT GTTCTTCCAC ATGGAAGATG TCGAAGGGCC GGACCTCGAA
GAGGGCCAGG AGCTCGAGTT CGACATCGAG TCCTCGCCCA AGGGACCGCG CGCGTCCAAC
GTCGTTCGGC AGTAA
|
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| Protein sequence | MATGKVDFFN DTGGYGFIET DDADDDVFFH MEDVEGPDLE EGQELEFDIE SSPKGPRASN
VVRQ
|
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