| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0003 |
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| Symbol | |
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| ID | 7399446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 3728 |
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| End bp | 5494 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643707057 |
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| Product | DNA polymerase II small subunit |
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| Protein accession | YP_002564679 |
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| Protein GI | 222478442 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.626198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCTGG AGTCGAACGC CCGGATCGTC AAGGAGCTCG CCAGGCGCGG ATACAACGCT
GAACGCGAAG CGATCACCCT CTTGGCGAGC GCGCCCGACT CCGCCGCTGC CGTCGAATCG
GTCGTCGACC GCGCCCCGGA CGACGCCCTC CGCATCACCA CCGACCACGT CCGCGCCGTC
ACGAACGACC AGTCAGTTTC TGGCGGTGAT TCAGCCGTTT CACCCCCCGA CTCGGCTGCG
TCCGGCCCCG GCTCGGCTGC GTCCGGCCCC GGCTCGGCTG CGTCCGGCCC CGGCTCGACC
GCCTCTGTCG CCGATCCAAC CACAGAATCA CCTCCAACCC GAAACAGCGA TCAACCGCCT
TCTACGACCT CGACGGAGGG ATCTCCAGTC GAAATGGAGG GGTCTTCTTT GGACCACGTT
CCCGGCTCCG ATCGCGATGC CGAGAACCCG GAGACCGATA TCGATACCGA AATCGACCGC
GACTCCGACA GTAATGCCGA CAGCAGCGTC GATCGCAGCC CCGATCGCAG CCCCGACAGC
ACCTCTCACC ACGATCCCGA TATCCGAGAG CTGGAAGTCG GTAACGACAT GACCGGTCAG
AGTACTGGGA CCGGGGAGTA CAGCGACTTC GTTCGGACGT TTCGCGACCG GTACGAGCGG
CTCTCGAAGG TCCTTCGCGG CCGCGTCAAC CACCGCCCTG CCGAGGCGAT CGCGGAGATG
CCCGGCGGGA GCGACGCCGC GATGATCGGC CTCGTCAACG ATGTCCGGTC CACCAAATCC
GGCCACTGGC TCGTCGAACT AGAAGACACG ACCGGAACCT TCCCCGCGCT GATCATGAAA
GACAAGGGGC TCGCCGACCT CGTCGACGAG ATCATGATGG ACGAGTGCCT CGCTATCGAG
GGGACGCTCG CCGATGACTC CGGAATCTTA TTCGCCGACT CCCTCCACTT CCCCGACGTT
CCCCGGACTC ACCGGACGGG GGCGGCCGAC CGTCACGTGC AGGCCGCGCT GATCTCCGAT
ATCCACGTCG GCAGCGACGA GTTCATGGTC GACGCATGGA GTAGCTTCAC CGATTGGCTC
CACACGCCCG AGGCCGAACC GGTGGAGTAC CTGCTGCTCG CCGGCGACAT GGTCGAGGGC
GTCGGCGTCT ACCCCGATCA GGACGAGGAA CTGGAGATCG TCGACATCTA CGACCAGTAC
GAGGCGTTCG CGGAGTACCT CAAGGAGGTG CCGGCTGACA CCGAAATCGT GATGATCCCC
GGCAACCACG ACGCGGTCCG ACTCGCGGAG CCCCAGCCCG GGTTCAACGA CGAGATCCGC
TCCATCATGG ATGTCCACGA CGCGCAGATC GTCTCGAACC CCGCGACCGT CACCGTCGAG
GGCGTCGACG TGTTGATGTA CCACGGCGTC TCCCTCGACG AGGTAATCGC GGAGCTCCCC
GAGGAGAAGG CGAGCTACGA CGAACCCCAC AAGGCGATGT ACCAGCTTTT AAAGAAGCGT
CACGTCGCGC CGCAGTTCGG CGGCCACACC CGCGTTGCCC CGGAGGAGCG CGACTACCTC
GTCATCGAGG ACGTGCCCGA CGTGTTCCAC ACCGGTCACG TCCACAAGCT CGGCTGGGGG
AAGTACCACA ACGTGCTCGC CGTCAACTCC GGTTGCTGGC AAGCGCAGAC CGACTTCCAG
AAGTCCGTCA ACATCAATCC CGACTCCGGC TACGCGCCCA TCCTCGACCT GGACACTCTC
GACATGACCG TCAGGAAATT CGCGTGA
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| Protein sequence | MPLESNARIV KELARRGYNA EREAITLLAS APDSAAAVES VVDRAPDDAL RITTDHVRAV
TNDQSVSGGD SAVSPPDSAA SGPGSAASGP GSAASGPGST ASVADPTTES PPTRNSDQPP
STTSTEGSPV EMEGSSLDHV PGSDRDAENP ETDIDTEIDR DSDSNADSSV DRSPDRSPDS
TSHHDPDIRE LEVGNDMTGQ STGTGEYSDF VRTFRDRYER LSKVLRGRVN HRPAEAIAEM
PGGSDAAMIG LVNDVRSTKS GHWLVELEDT TGTFPALIMK DKGLADLVDE IMMDECLAIE
GTLADDSGIL FADSLHFPDV PRTHRTGAAD RHVQAALISD IHVGSDEFMV DAWSSFTDWL
HTPEAEPVEY LLLAGDMVEG VGVYPDQDEE LEIVDIYDQY EAFAEYLKEV PADTEIVMIP
GNHDAVRLAE PQPGFNDEIR SIMDVHDAQI VSNPATVTVE GVDVLMYHGV SLDEVIAELP
EEKASYDEPH KAMYQLLKKR HVAPQFGGHT RVAPEERDYL VIEDVPDVFH TGHVHKLGWG
KYHNVLAVNS GCWQAQTDFQ KSVNINPDSG YAPILDLDTL DMTVRKFA
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