Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_3174 |
Symbol | |
ID | 7399303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012028 |
Strand | - |
Start bp | 404865 |
End bp | 407894 |
Gene Length | 3030 bp |
Protein Length | 1009 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643706974 |
Product | hypothetical protein |
Protein accession | YP_002564596 |
Protein GI | 222476075 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGATC GCTTCTTCGG TCGCGACGAC GACCAAGACG CTGCGTCGAA TGCAGACGCT GCCTCGGACG AGTCAGCAGA GAGTGACGCA GGCCCGATGG CTGAGACCAG TCCGGGCCCG CAGTCACTGC TTGGCGAAAC GTACGACATC ACCGAACAGA ACACGGACTA CGTCGGGAGC AAGCCCGTCA TCACCGAGAC GCAAAATGAG GGCACTGTCG CCGGCTCATA CATCCGCGAG ATGCTCGAAT CGGGCGTCGA TACAGCACCA TCGCCGCTGT GGATCGGCTA CGACGAGGAC GCCCAACGAG GGTTCCGTGA AGCACCGCTC CAGTTTGAGT CGCTCTTCCG GCACATCTGG ATCACCGGCA CCACCGGCTA CGGGAAAACG ACGGAACTAT TGAACATGAT GGTCCAGTGG GCGTATTCAG GGTACGGATT CGTCTACTTC GACCCGAAGG GCCGTGACTC TCGGGAACTC CTGCGGATGC TCCCTGAAGA CCGGCTCGAC GATGTTGTCT GGATCGAACC CGGCTCATCC GAACACGACA AGACGGTCGG GCTGAACTTC CTCGAAGTTC CCGACTGCGA AACCGAAGAA GAGCGTGAAA ACGAGATCGA GAATCGCATC GAGAACCTCA AAGCGATCTT CGATACGGAC GAGTACTGGG GGATCAACAT GGAGTCGATC ACCGAGTCGA TGGGCCGGGC AATGATGCAG TCCGACCAGC CGTTCTCGGT GATCGATATG TACTTCACGC TGTTGCACGC TGAGCGCCGC GAAGAGTTCG CCCTCGACGT CGACGATCCC TACGTTAGGG AGTTCTGTCT CGAAATCGCG CGGATGGACG ACGAAACCGT CCGGCCGCTG CTCAAACGCA TCAAGTCGTG GGTCGAAAAC TCGGTCATCC GGCGGATCAT TGCCCACCGC GAGAGTACCA TCGACTTCCG TGATATCATC GACAACGACC GGATCGTCAT CGTCCGTACG CCCGTCGAGA ACACGGACAT CAAGAAGATG GTCACACTCG GCGTGATGCG AAACCTCTGG AGCGCCATCC AACAACGGTC GTACGAACGC GATACCGATC CAGATCCGTA CTTCGTGCTC TGTGACGAGT TCGACGACAT CGCGAGCGAC AACCTCGACA TCGAGTCGAT GCTCGCTCGT GCCCGGTCGA TGCGCCTCTC CGTGACGTTG TCGTCGCAGT ATCCCTCACA GTTCGGTGAG GACACGCGCA AGGCGATGCA GAACAACTGC GACAACCTCA TCGCCTTCTC CGTGAACGAC GTCGACGACG CCCAGCTCTT GATGAAGCGC TTTCGCGACT ACACGGCCGA AGACCTCATC TCGACCGACC AGTACCAGGC CTGGACGAAA CTCCCACTGG AGGGTGGTCG GTACTCCGAG CCAGTGCTCC TCCGAACGTT CCCGCCGTAT CCACCACTGC GGTCGGCCGA TTCGGTCGAC GACATCATCG AGGCGAGTTT AGACCGGTAT GGAACCGACC CGCTTACCGA CGCGGAGATC ATGCAGAACC TCATCTACAG CGACGCCAAC GAGGCAGCGA ATCCGACACA GATTCTGGAC AAGACGATGG CCGAGGCGAT TCGTGCCGTT CAAATCCGAG AGAACGCCCG CGAGGCAAAC GGCTGGGTGG ACATCGTCGC CATCGACGAG GAACTCTCGA CACGCCTCGA GAATAGTCAG GCTGAGATCG ACTACGAGTA CGAGGACTTA CCGGACGTGC GTGACGCGTC GCGGTTAATC GATGTCGAGT TACAGGACGG CGAGATTGTG GCGCGGCTCT CCGACGACGG GGAAACGGAG GTGCAGCCCG AAACGGGGAC TGCTAGATCG GCAGGAGGAA TGAGCCACGA TGCTGTACTC ATGGATACTG AGACGGCGCT CACCGAGCGT GGGTTCAGTG TTGATATTCT CGAACAGGAC GGGAGCGAGC AACCCGACGC CACCGCGACG CACCCAGACC ACGACGTGGT GTTCAACATC GAGGCCGAGA CGACGACGCC TGACCGACCC GCGAAAGTCT TGCAGAACCT CAAACGAGCG CACGACGCAG ATCGCGTCCC GCTCTTCGTC GTCCGCCCTG GCGATCCTGA GACCGAGTGG GCGACGCGAC TCGAGAATAT TCTCTCGCCG CCGCTGCGAG AGCGGGCGGA CGGCACCGAG CAGTTCTACA ACTGCGATGA GATCGTGACC TTCGGCGGTG GGGCGACCGC CCACGGTGGG GTAACCGCCG TTCGGCCCCG GACGGCCGAC ACAAATCGGA CAGTCTGGAC GCGCGACGAT GGTGAGCGTG TGCTGTCAGA CGGCGAGACG GAATTCGCCC GCGTTCCAGA TGAGGGGGCG CTCTCGAAAG ACGGCGTCCC GGCCTACTAC AGTTACGACC ACGAAACCGG GCAGTACACC GTCCATAAAC CCGGAGAGAC CCGCGTCTTT GACTCGAAAG ACGAGTTCAA GGCCGAGTGG ACGCCGATCA AGCGACCGTT CATTCCCGAT GTCGAACTCC CAGATGCGGA CTATTCGCGT GACAGCTACG TCGTGTTGCT GCTTCCGGAG GACGGTGCTC CTACGGTATT CCAACAGGGA GAATCGTATA CACTCTCCGA GAGCCCAGAC GAGGAGGACT TGTGGCCGGA CGCCCCCACC AGTGAGCACG CACAGGCCAC AATATCGATG GATTCCGGTG AGGAGACTCC ATCGACGGAG TCTACCGCAC CTTCAGATGG GTCGGTGGAG ATCGATCCGA GTGGTGACGG CATCGAGGCG TTCGCAGCGA TGTACATCAG AGAAGCTGAG GGAGCCCAGG TGCCAAAGGA AACGCTGTTT CAGGCGTACT CGGCCTGGAC TGACCAGCAC GATATTGAGG GGACAAATGC GAGTTGGTTC GGTCGAAAGC TCGCGAACGT CGTCGAGTAT GAGAATGATC GGGTCAGAGA CGGCGACGAT CTGGTGACTG TCTACACCGG TGTCGACCTG ACGCCAGCGG GATCACAGTT CCTTGAATAA
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Protein sequence | MFDRFFGRDD DQDAASNADA ASDESAESDA GPMAETSPGP QSLLGETYDI TEQNTDYVGS KPVITETQNE GTVAGSYIRE MLESGVDTAP SPLWIGYDED AQRGFREAPL QFESLFRHIW ITGTTGYGKT TELLNMMVQW AYSGYGFVYF DPKGRDSREL LRMLPEDRLD DVVWIEPGSS EHDKTVGLNF LEVPDCETEE ERENEIENRI ENLKAIFDTD EYWGINMESI TESMGRAMMQ SDQPFSVIDM YFTLLHAERR EEFALDVDDP YVREFCLEIA RMDDETVRPL LKRIKSWVEN SVIRRIIAHR ESTIDFRDII DNDRIVIVRT PVENTDIKKM VTLGVMRNLW SAIQQRSYER DTDPDPYFVL CDEFDDIASD NLDIESMLAR ARSMRLSVTL SSQYPSQFGE DTRKAMQNNC DNLIAFSVND VDDAQLLMKR FRDYTAEDLI STDQYQAWTK LPLEGGRYSE PVLLRTFPPY PPLRSADSVD DIIEASLDRY GTDPLTDAEI MQNLIYSDAN EAANPTQILD KTMAEAIRAV QIRENAREAN GWVDIVAIDE ELSTRLENSQ AEIDYEYEDL PDVRDASRLI DVELQDGEIV ARLSDDGETE VQPETGTARS AGGMSHDAVL MDTETALTER GFSVDILEQD GSEQPDATAT HPDHDVVFNI EAETTTPDRP AKVLQNLKRA HDADRVPLFV VRPGDPETEW ATRLENILSP PLRERADGTE QFYNCDEIVT FGGGATAHGG VTAVRPRTAD TNRTVWTRDD GERVLSDGET EFARVPDEGA LSKDGVPAYY SYDHETGQYT VHKPGETRVF DSKDEFKAEW TPIKRPFIPD VELPDADYSR DSYVVLLLPE DGAPTVFQQG ESYTLSESPD EEDLWPDAPT SEHAQATISM DSGEETPSTE STAPSDGSVE IDPSGDGIEA FAAMYIREAE GAQVPKETLF QAYSAWTDQH DIEGTNASWF GRKLANVVEY ENDRVRDGDD LVTVYTGVDL TPAGSQFLE
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