Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_3140 |
Symbol | |
ID | 7399271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012028 |
Strand | - |
Start bp | 379729 |
End bp | 380724 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643706942 |
Product | Zinc finger TFIIB-type domain protein |
Protein accession | YP_002564564 |
Protein GI | 222476043 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGAGG GGCTCACTGT ACTGGCGAGT TCCCGAAACA CGGTGAGAAC GATGGCAACT AGAGACATCT ACGAGACGAC GTTCGACGAA GACGTCCAGA CCGACACGAG GTCGAATCAG TGTCCCGAGT GCGACGGCCG AGTCACCACT AATACAGTCG AAACCGTCTG CGAGGAGTGT GGGCTCGTCG TCGACGAGCA GCGGATCGAC CACGGACCAG AGTGGCGAGG GTTCGACGAA GACGAGCGTG AACGGACTGG CGCTCCGTTG ACGGCAGCGC GGCACGATCG GGGGTTGTCG ACGGAGATCG GGCGCGGGAC CGATACGAAC GGGAATGAAC TCTCCGGAAA GAAGCGACGC CGGCTCGCCC GGATGCGGCG TGAACAGACG CGCGGGCGGT TTCAGTCGAA AGCTGAACGC AACCTCGCAT ACGGGCTGGG CGAGGTTCGC CGTCTGGCGA GTACCCTCGA GCTCTCCGAT TCGATCCGCG ACCAGGCGTG TCAGCTCTTC CGGAGTGCCC AGAACGAGGA CCTGCTTCGG GGCAGATCCA TCGAGGCCAT CGCCACGGCT AGCGTGTACG GGGCCTGCCG CTGTAACGAT CGACCAGTGA TACTCGACGA GGTCGCTGAT TCAGCACGCG TCGAACTGTC TCGAGTGAGA AACGCGTACA AAACGCTGAA TACAGAATTA GGACTCCCTA CCCCACCGAG AAGGCCGCAG TCGTTCATTC CGCGCTTCGC GTCAGAATTG GACGTCGCTG ACACGGTCCG ACAGCGGGCG TTTGAACTCG CAAAGGGCGC TGAAGCGACG ATTATCTCGA ACGGATGCCA ACCGACAGGT GTCGCAGCGG CCTGCCTCTA TAAGGCTGCT CGGGAGCAGG GACAATTTTT CACGCAAACA GATCTCGCAG AGGTGGCGGA GACAACGCCG GTAACGATAC GCACACGATG GAACGAACTA GAGGAGGTCG ACGATTCGAA GTCAGCCCCC GCGTAG
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Protein sequence | MGEGLTVLAS SRNTVRTMAT RDIYETTFDE DVQTDTRSNQ CPECDGRVTT NTVETVCEEC GLVVDEQRID HGPEWRGFDE DERERTGAPL TAARHDRGLS TEIGRGTDTN GNELSGKKRR RLARMRREQT RGRFQSKAER NLAYGLGEVR RLASTLELSD SIRDQACQLF RSAQNEDLLR GRSIEAIATA SVYGACRCND RPVILDEVAD SARVELSRVR NAYKTLNTEL GLPTPPRRPQ SFIPRFASEL DVADTVRQRA FELAKGAEAT IISNGCQPTG VAAACLYKAA REQGQFFTQT DLAEVAETTP VTIRTRWNEL EEVDDSKSAP A
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