Gene Hlac_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2980 
Symbol 
ID7398957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand+ 
Start bp241402 
End bp242331 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content63% 
IMG OID643706790 
Productribulose-1,5-biphosphate synthetase 
Protein accessionYP_002564412 
Protein GI222475891 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1635] Flavoprotein involved in thiazole biosynthesis 
TIGRFAM ID[TIGR00292] thiazole biosynthesis enzyme 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGT TCAACGGATT CAGCAGAGCA GGCGAGGCGG AAGTCACGCG AGCGATCACC 
GAAGAGTTCG CCGACGAGTT CATGGATTAC ACCGAAAGCG ACGTCATCAT CGTCGGTGGC 
GGTCCCTCGG GGCTGATGGC CGCCAAGGAG CTCGCCGAAC AGGGTGTGAA GGTCATGGTC 
GTCGAGAAAA ACAACTATCT CGGCGGCGGC TTCTGGCTCG GTGGCTTCCT GATGAACACG 
CTCACCGTCC GCGAACCGGC CGACGAAGTG CTCGACGAAC TCGACGTGCC GCATCAGGAA 
AGCGAGGAGG TAGAGGGGCT CCACACCGCC AAAGGCCCCC ACGCCTGTTC GGCGCTTATC 
AACGCGGCCT GCGATGCCGG TGCCAAAATC CAGAACATGA CCGAGTTCAC CGACATCGTC 
GTTCGAGAGA ACCACCGCGT CGCTGGCATT GTCATGAACT GGACGCCAGT CCACGCCCTC 
CCACGTGAGC TCACGTGTGT CGACCCAATC GCCGTCGAAT CCGAACTCGT TATCGACGCC 
ACCGGCCACG AGGCCGTCGT CGTCTCGAAA CTCCAGGAAC GTGGCGTCCT CGACGCGAAA 
GGAATCAGCC ACGCTGAGGA GCACAACACC GGGATGGACC AGAGCGAGGA CGGCGAATAC 
GGTGCGCCCG GTCACGACTC GCCGGGCCAC GACTCGATGT GGATCACCGA GAGCGAAGAC 
GTCGTCGTCG AGGAGACTGG CAAAGTCCAC GACGGCGTGA TCGCCACCGG TCTTGCCACG 
GCGACCACCC ATGGCCTGCC GCGGATGGGC CCAACGTTCG GTGCCATGCT GCTGTCCGGC 
AAGCGCGCTG CCTCCATCGC GCTTGACGAA CTCGGCGAAG ACGGCTCGGC GGTCGACTTC 
TCGGTCGCCC CGTCGCCTGC TGACGACTAA
 
Protein sequence
MTQFNGFSRA GEAEVTRAIT EEFADEFMDY TESDVIIVGG GPSGLMAAKE LAEQGVKVMV 
VEKNNYLGGG FWLGGFLMNT LTVREPADEV LDELDVPHQE SEEVEGLHTA KGPHACSALI 
NAACDAGAKI QNMTEFTDIV VRENHRVAGI VMNWTPVHAL PRELTCVDPI AVESELVIDA 
TGHEAVVVSK LQERGVLDAK GISHAEEHNT GMDQSEDGEY GAPGHDSPGH DSMWITESED 
VVVEETGKVH DGVIATGLAT ATTHGLPRMG PTFGAMLLSG KRAASIALDE LGEDGSAVDF 
SVAPSPADD