Gene Dtpsy_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3458 
Symbol 
ID7381992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3703414 
End bp3704619 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content65% 
IMG OID643656778 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002554884 
Protein GI222112620 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAC GTCACCTCCT GCAACTTTCC GCATTCGGCG CGCTGCCCGC CTCCCTGGGC 
TTGGGCGCCA GCGCCTGGGC ACAGTCCAAG GACGCGATCC AGTTTGGCTG CCCCGTGCCC
ATGTCGGGCG CATTCGCCGC GAACGGCAAG TTCGCGGACC TGGGAATGAA GCTCGCCATC
GAGCAGTACG GCAAGGCCCT GGACCGGCCG CTGGCCTACA CGCTGCTCGA TACCGAAGGC
AAGCCCGCCA CCGCGGTGCG CAAGGTGCAG GAGGCGGCTC AGCAAAAGGG CGCGCGCTTC
TTCGCAGGCG GCATCCTGTC GTCCGAAGCG CTGGCCATGG GCAAGGAAGC CGAGAAGGCC
GGCGGCATCT TCATCACGAC CGCAGGGGCC GACGAGCTCA CCGGCTCCGA CTGCAATGGC
GCCACGTTCC GCTGGTCGGT ACCGACCTTC GGCGCCATCG AGCAGACCGT GCGCCCCTTG
CTCGACGCGC ACCCGAAAGC CAAGCGCTGG TACACCATCA CGCCGCAGTA CGTGTTCGGC
GACGGCCTGC TGACCGCTGC CAAGAACATC TTCAAGGAAA AGGGCATCGA GCACGTGGGC
AACAGCTACC ACTCGCTGAC CGAGAAGGAG TTCAGCGGCT ACCTCACCAA CGCCATGGCC
GCCAAGCCCG ACGTGCTGCT GCTGCTGAAC TTCGGCGCCC AGTCGTCCGA CGCGCTGCGC
CAGGCCATCA GCTTTGGCAT GCACAAGAAC ATGACCATCC TGATCGCCTG GGCCTCGGGC
CTGGAGCAGT TCGAATCGCT GGGCGCCGAT CTGTGCGATG GCGTGTACTT CGGCGCGCAG
TACTGGCACA CGGTGGACAC GCCGCTCAAC CAGGACCTGG TCAAGCGCAC CCAGGCCGCG
TTCAAGTCCA ACCCCAACTA CAGCCTGGCG GGTTCGTACA TCTGCACCAA GCTGCTCCTC
GACGCCATCC TCAAGGCCGG CACGGTGGAC CAGAAGGCCG TGGTGGCAGC CCTGGAGGGC
ATGAAGTACC AGGGCCTCAC GGGCGAGGAG GAAGTGCGCA AGGCCGACCA CCAGGTGCTC
AAGAACTACT ACCTGCTCAA GGGCAAGGCC AAGGCCAAGA TGAAGAACAA GGACGACTAC
GTGGACGTGG TCAGTTCCGG CAAGTCCTTC CTGCCCATCG ACCGCACCGG CTGCAAGCTG
GCCTGA
 
Protein sequence
MQRRHLLQLS AFGALPASLG LGASAWAQSK DAIQFGCPVP MSGAFAANGK FADLGMKLAI 
EQYGKALDRP LAYTLLDTEG KPATAVRKVQ EAAQQKGARF FAGGILSSEA LAMGKEAEKA
GGIFITTAGA DELTGSDCNG ATFRWSVPTF GAIEQTVRPL LDAHPKAKRW YTITPQYVFG
DGLLTAAKNI FKEKGIEHVG NSYHSLTEKE FSGYLTNAMA AKPDVLLLLN FGAQSSDALR
QAISFGMHKN MTILIAWASG LEQFESLGAD LCDGVYFGAQ YWHTVDTPLN QDLVKRTQAA
FKSNPNYSLA GSYICTKLLL DAILKAGTVD QKAVVAALEG MKYQGLTGEE EVRKADHQVL
KNYYLLKGKA KAKMKNKDDY VDVVSSGKSF LPIDRTGCKL A