Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3458 |
Symbol | |
ID | 7381992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3703414 |
End bp | 3704619 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643656778 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002554884 |
Protein GI | 222112620 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACGAC GTCACCTCCT GCAACTTTCC GCATTCGGCG CGCTGCCCGC CTCCCTGGGC TTGGGCGCCA GCGCCTGGGC ACAGTCCAAG GACGCGATCC AGTTTGGCTG CCCCGTGCCC ATGTCGGGCG CATTCGCCGC GAACGGCAAG TTCGCGGACC TGGGAATGAA GCTCGCCATC GAGCAGTACG GCAAGGCCCT GGACCGGCCG CTGGCCTACA CGCTGCTCGA TACCGAAGGC AAGCCCGCCA CCGCGGTGCG CAAGGTGCAG GAGGCGGCTC AGCAAAAGGG CGCGCGCTTC TTCGCAGGCG GCATCCTGTC GTCCGAAGCG CTGGCCATGG GCAAGGAAGC CGAGAAGGCC GGCGGCATCT TCATCACGAC CGCAGGGGCC GACGAGCTCA CCGGCTCCGA CTGCAATGGC GCCACGTTCC GCTGGTCGGT ACCGACCTTC GGCGCCATCG AGCAGACCGT GCGCCCCTTG CTCGACGCGC ACCCGAAAGC CAAGCGCTGG TACACCATCA CGCCGCAGTA CGTGTTCGGC GACGGCCTGC TGACCGCTGC CAAGAACATC TTCAAGGAAA AGGGCATCGA GCACGTGGGC AACAGCTACC ACTCGCTGAC CGAGAAGGAG TTCAGCGGCT ACCTCACCAA CGCCATGGCC GCCAAGCCCG ACGTGCTGCT GCTGCTGAAC TTCGGCGCCC AGTCGTCCGA CGCGCTGCGC CAGGCCATCA GCTTTGGCAT GCACAAGAAC ATGACCATCC TGATCGCCTG GGCCTCGGGC CTGGAGCAGT TCGAATCGCT GGGCGCCGAT CTGTGCGATG GCGTGTACTT CGGCGCGCAG TACTGGCACA CGGTGGACAC GCCGCTCAAC CAGGACCTGG TCAAGCGCAC CCAGGCCGCG TTCAAGTCCA ACCCCAACTA CAGCCTGGCG GGTTCGTACA TCTGCACCAA GCTGCTCCTC GACGCCATCC TCAAGGCCGG CACGGTGGAC CAGAAGGCCG TGGTGGCAGC CCTGGAGGGC ATGAAGTACC AGGGCCTCAC GGGCGAGGAG GAAGTGCGCA AGGCCGACCA CCAGGTGCTC AAGAACTACT ACCTGCTCAA GGGCAAGGCC AAGGCCAAGA TGAAGAACAA GGACGACTAC GTGGACGTGG TCAGTTCCGG CAAGTCCTTC CTGCCCATCG ACCGCACCGG CTGCAAGCTG GCCTGA
|
Protein sequence | MQRRHLLQLS AFGALPASLG LGASAWAQSK DAIQFGCPVP MSGAFAANGK FADLGMKLAI EQYGKALDRP LAYTLLDTEG KPATAVRKVQ EAAQQKGARF FAGGILSSEA LAMGKEAEKA GGIFITTAGA DELTGSDCNG ATFRWSVPTF GAIEQTVRPL LDAHPKAKRW YTITPQYVFG DGLLTAAKNI FKEKGIEHVG NSYHSLTEKE FSGYLTNAMA AKPDVLLLLN FGAQSSDALR QAISFGMHKN MTILIAWASG LEQFESLGAD LCDGVYFGAQ YWHTVDTPLN QDLVKRTQAA FKSNPNYSLA GSYICTKLLL DAILKAGTVD QKAVVAALEG MKYQGLTGEE EVRKADHQVL KNYYLLKGKA KAKMKNKDDY VDVVSSGKSF LPIDRTGCKL A
|
| |