Gene Dtpsy_3421 details

Gene Information

• Locus tag: Dtpsy_3421
• ID: 7383660
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 3665832
• End bp: 3667904
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 643656742
• Product: CoA-binding domain protein
• Protein accession: YP_002554848
• Protein GI: 222112584
• COG category: [C] Energy production and conversion
• COG ID: [COG1042] Acyl-CoA synthetase (NDP forming)

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.678339
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGTGC TGTACGCACT GAGCCCCCGC GCCGTGGCCA TCCTCGGCGC GTCGGACAAC 
CCCATCAAGG CCGGTGGCCG GCCCATCGAT TACATGCGCC GCCACGGCTA CGCGGGCCGC 
ATCTTCCCGA TCAACCCGAA CCGCAGCGAG GTGCAGGGCC TGCCCGCCTA CGCATCGCTG 
CGGGCGCTGC CCGAGGCGCC CGACGCCGTG GTCATCAGCC TGCCCAGCGA AGACGTGGCC 
GCCGCCATCG ACGACTGCGT GGCCGTGGGC GCCAAGGCGG CGGTGATCTA CTCGTCCGGT 
TTTGCCGAAC TGGGCGATGC GGGCCGCGCG CAACAGGCCG ATCTGCTAGC CCGCGCCCGG 
CGTGGCGGGC TACGCCTGTT TGGCCCCAAT TGCCAGGGCG TGGCCAACTT CGCCAGCGGC 
GCCATCCTCA ACTTCTCGAC CATGATCAAC GAGAGCCCGC CGGGCGACGG CCCCGTGGCC 
ATCGTCAGCC AGAGCGGCGC GGGCGCGGCC ATTCTCTACG GCGGGCTGCG CCGTGCGGGC 
ATAGGCGTGC GCTACATGGT CTCCACCGGC AACGAGGCCG ACATCTGCGC CGCCGAGGCC 
GTGCGCGCCG TGGTGCAGGA CGAGCGCATC CGCCTCGTCG TGCTCTACGT CGAGACCTTG 
CGCCAAAGTG CCTACCTGGC CGAGGCCGCG CGGCTGGCGC GCGAGCGCGG CGTCACCATC 
CTGGCCGTCA AGGCCGGGCG CACCAGCGCC GGCCAGGCCA CGGCCAGCTC GCACACCGGC 
GCGCTGGCGG CCGAGGACGC GCTGGCCGAT GCCTTCTTGC GCCAGCACGG CATACCGCGC 
CTGGCGGACT TCCGCGAGCT GATCGACTAC GCGCCGCTGT TCCTCTCGCA ACCCGCCGCG 
CGCGGCCCCC GGGTGGTCAG CATCAGCAAT TCCGGCGCCA CCTGCGTGCT CGCGGCGGAT 
GCGGCCGAGG AGTTCGGCCT GGCCGTGGAG CAGTTCGACG CCGCCACGCT CGCAGGGCTC 
CAGCAGGCCC TGCCGTCCTA CGTGACGGCG CGTAACCCCA TCGACATGAC CACGGCCCTG 
CTGGGCAAGC CCGAGACCTT CGGCAACACG CTGCGGGCGC TGTCCGGCAG CGGCGCGGCC 
GACCTGGTGC ATGTGGGTTT TCCGATCGGC GGCGAGGGCT ACGACTTTGC CGATTTCGCC 
GCCCAGGCCA GCCGCTTCGC ACAGGACAGC GGCATGCCGA TCGCCGTCAG CGTGAACCAG 
GACTGGGTGG CCCAGGCCTT CCAGGCTCAG GGCGTGCCTA CCTTCTGGAG CGAGCGCGCC 
GCCATGCGCG GCCTGGCGCT GCTGGCCGAG CAGGCGGGCG CTGCGGCGCA GCCCCCGGCG 
ATTGCCGCGC CCATGGCAGC GCCATGCGTC ACGCTGGACG AGCCTTCCAG CCTGGCCCGG 
CTGCAAGCCG CCGGCCTGCC GGTGATGCGC CATGCGGTCG CCACCAGCGA GGCGCAGGTG 
CGCGCCGCCT TCGGCACGCT GCCCGCGCCG CTGGTGGCCA AGGGCGTGTC GGCCGACCTG 
GCGCACAAGT CCGAGCATGG CCTGGTACGG CTGAACCTGC GCGCGGCAGA GCAGGCCGTG 
CAGGCCTTGC ACGACTTCGC CGCCACGCTG CGCGGCCTGG GCGCGCAGGA CGGCGGCCTG 
CTGCTGGGCG CGCAGCACCA GGCCGATTTC GAGCTGGCCC TGGGCGCGCA TGTCGATCCC 
GAATTCGGCG TGGCCGTGAT GATCGGCCAG GGCGGCGTGC TGGTCGAGGC GCTCAGGGAC 
GTGCAATTCC TGGTCGCGCC CTTCAGCCGT GCGCAGGCGC TGGCCGCGCT GGGCCGCCTG 
GCCATCGCGC CCGCGTTCGC CGCCGTGCGC GGCATGCCGG CGGTGGCATT GGAGCCGCTG 
GCCGACATGA TGGTGCGCCT GGGCGACTGG ATGCTGGCCC AGGCCGGCCA AGTGCAGTCG 
GTCGATGCCA ACCCGGTGCT GGTGGCGCGC GGCGCGCAGG CGCCCGTGAT CGTCGATGCC 
GTCGTCGCCG TGGCGCAGGA GGGTGCCGTA TGA 

 

Protein sequence

MSVLYALSPR AVAILGASDN PIKAGGRPID YMRRHGYAGR IFPINPNRSE VQGLPAYASL 
RALPEAPDAV VISLPSEDVA AAIDDCVAVG AKAAVIYSSG FAELGDAGRA QQADLLARAR 
RGGLRLFGPN CQGVANFASG AILNFSTMIN ESPPGDGPVA IVSQSGAGAA ILYGGLRRAG 
IGVRYMVSTG NEADICAAEA VRAVVQDERI RLVVLYVETL RQSAYLAEAA RLARERGVTI 
LAVKAGRTSA GQATASSHTG ALAAEDALAD AFLRQHGIPR LADFRELIDY APLFLSQPAA 
RGPRVVSISN SGATCVLAAD AAEEFGLAVE QFDAATLAGL QQALPSYVTA RNPIDMTTAL 
LGKPETFGNT LRALSGSGAA DLVHVGFPIG GEGYDFADFA AQASRFAQDS GMPIAVSVNQ 
DWVAQAFQAQ GVPTFWSERA AMRGLALLAE QAGAAAQPPA IAAPMAAPCV TLDEPSSLAR 
LQAAGLPVMR HAVATSEAQV RAAFGTLPAP LVAKGVSADL AHKSEHGLVR LNLRAAEQAV 
QALHDFAATL RGLGAQDGGL LLGAQHQADF ELALGAHVDP EFGVAVMIGQ GGVLVEALRD 
VQFLVAPFSR AQALAALGRL AIAPAFAAVR GMPAVALEPL ADMMVRLGDW MLAQAGQVQS 
VDANPVLVAR GAQAPVIVDA VVAVAQEGAV