Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2725 |
Symbol | |
ID | 7385492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2899623 |
End bp | 2900900 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643656033 |
Product | Fmu (Sun) domain protein |
Protein accession | YP_002554159 |
Protein GI | 222111895 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0161208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCCCA AAGCCCTTGT GGACGCCTGC GCGGAACTCG TCAGGCTGGT CCTTACTTTT GAACACCCGG CCGACGCCGT GGTCTCGCGC TACTTCCGCG AGCACCGCGG CCTGGGCCCG CGCGAGCGCG CCACGCTGGC CGAAACCGTC TACAACGTCC TGCGCAAGAA GCTGCTGTTC GAGCAGCTGG CGCGCTCGGG CGCGGGCCCC AAGGAGCGGC GCCTGGCCAT CCTGGGCTTT CACGGCCCGC GCGACTTCGT CAAGAGCGCA CTGACCGAGC AGGAAAAGTC CTGGCTGGAC CAGTGCGACG CCGTGCGTCC TGAAGACCTG CTGGCGCCGC ACCGCCACAA CCTGCCCGAA TGGCTGGTGG CGCCGCTCAA GGAGCAGCTG GGCGAGAGCG GCTTCTGGGC CCTGGCCGAC AGCCTGGCGC AGCCTGCGCC ATTGGACCTG CGCGTCAATG CCTTGAAGGA AAAACGCGAC CAGGTGCAGA AGGAGCTTGC GCAAGCAGCT ATCAAATCGG TAGTGACACC CTATTCTCCC TGGGGACTGC GCATCGCCGG CAAGCCCGCG CTCACCAAGC TGGACGCGTT CACGCGCGGC GCTATCGAGG TGCAGGACGA GGGCTCGCAG TTGCTCGCGC TGCTGCTGGA CGCCAAGCGC GGCGAGATGG TGGTGGACTT CTGCGCCGGT GCCGGCGGCA AGACGTTGGC CATCGGCGCG GCCATGCGCA GCACGGGGCG GCTGTACGCC TTCGACGTGT CGGCCCACCG GCTGGAGGCG CTCAAGCCCC GCCTGGCGCG CTCGGGCCTG TCCAACGTGC ACCCCGCGGC CATCGCCCAC GAGCGCGACG AGCGCGTCAA ACGCCTGGCC GGCAAGATCG ACCGCGTGCT GGTGGACGCC CCCTGTTCGG GCCTGGGCAC GCTGCGCCGC AACCCCGACC TGAAGTGGCG CCAATCGCCC GAGGCGCTGC GGGAGCTGGC CGGCAAGCAG ACCGCCATCC TGGAAAGCGC GGCGCGCCTG GTCAAACCTG GCGGGCGGCT GGTCTATGCC ACGTGCAGCG TGCTGCCGCA GGAAAACGAG GCCATTGCCG AAGCCTTCGG CGCGGCGCAT GCCGATTTCG AGCCGCAGGA CGCCGGCGCG CTGCTCACGC AGCTGAAGGT GCCCGATGCC GCACGCCTGT GCCATGGCGG CGCCAGCGGC ACTGGATATC TGCGGCTGTG GCCTCATCTG CACCAGACGG ACGGTTTCTT CGCTGCCGTC TGGACCCGCC GCGCGTAA
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Protein sequence | MHPKALVDAC AELVRLVLTF EHPADAVVSR YFREHRGLGP RERATLAETV YNVLRKKLLF EQLARSGAGP KERRLAILGF HGPRDFVKSA LTEQEKSWLD QCDAVRPEDL LAPHRHNLPE WLVAPLKEQL GESGFWALAD SLAQPAPLDL RVNALKEKRD QVQKELAQAA IKSVVTPYSP WGLRIAGKPA LTKLDAFTRG AIEVQDEGSQ LLALLLDAKR GEMVVDFCAG AGGKTLAIGA AMRSTGRLYA FDVSAHRLEA LKPRLARSGL SNVHPAAIAH ERDERVKRLA GKIDRVLVDA PCSGLGTLRR NPDLKWRQSP EALRELAGKQ TAILESAARL VKPGGRLVYA TCSVLPQENE AIAEAFGAAH ADFEPQDAGA LLTQLKVPDA ARLCHGGASG TGYLRLWPHL HQTDGFFAAV WTRRA
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