| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2539 |
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| Symbol | |
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| ID | 7384810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2701216 |
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| End bp | 2704833 |
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| Gene Length | 3618 bp |
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| Protein Length | 1205 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643655847 |
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| Product | type 4 fimbrial biogenesis protein PilY1 |
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| Protein accession | YP_002553974 |
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| Protein GI | 222111710 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTCC ATGCCCCCTC CCACACCCGT TTCAAGAAAA CCCTGCTCGC GTCGCTGATC
GGCGCGGCGC TCGCGCCGCA CACTGCGCTG GCGCTGGACT TTGCCCAGGC GCCGCCGGGC
ACGGTGGAGC CGTATGTGGC GCCGAACGTG ATCTTGTCGC TGGACGATTC GGGCAGTATG
AATACCGCAG ACATGACACT CCCTGGGGTA CTGCGAGATC CCAGTAGGCC TTACTGCAAC
AGAACAGGAG GGTGTAGCGG TGGCAACGCT TACAACCCCT GGGTAACCGC GCCCCAAACC
CTTACCCGCA CGAAGGTGCT GGCTGACGCC CTCAAGGACA CGTTCAGTGA CACCGCTCTG
CTGCCCAACG GAAAAATCCG CATGGCTTGG CAATCCATGA ATAACAGCAC CACCGGCTCC
GGCCTGACGC TCAGCGACCT GGGCACTGCC GCAGCAACGA ATGGAACCAG CCACAACATG
ATGCGCGTAC TGGACGCAAC CCATCGCGCC AACTTCATCG CGTATGCCAA TAAGTACAGT
GCTAGCGGCA ACACCCCCAC CCATCGCATG GTGCAACGTG CAGACGACTA CATGCGCGCG
ACTCCACACC AGAACGGCCC CTGGGCCGAT GTTCCCGGCA CAAAGCTGGC GGACGCGAAA
AACGACAACA AACCACTGGG CTGCCGCCGC AATTACCACA TCCTACTGAC TGACGGTGGC
TGGAACCAAT ACGTTCAGTC CACCACCCCC CTCAATTACG ACAACCGCAC GAGCCCCGAC
CTGCCCAACG GCAAACCCTA TACCGCCACG GCGCAAACCC GCCTCTACCG GGATAGCGAG
GACTTCACCA CCATTGCCGA CTGGGCCTTC CAAAGCTGGG CCAATCCGCT GCGCCCCGCC
ACTGATCTCC ACGGCAAAGT GTCTCCCCTG CCCGAGTATG ACAATGCGCC TGCCTCTGAA
ACCATCACGA ACCGCGTGAC CAAAACAACG GCCACGCTGG AGAAATTCTG GAACCCCAAA
TACGACCCGG CCGACTGGGC GCACATGGTT ACTTTCACCA TCGGTTTCAG CACGGACGCG
CTTCCCCAGA AAAACTACAG CCTCAACAAA GACGGCACAT CGGTCACGGA TCAAGGCGCG
ATCACCGCTC CGACCACCCT GCTGCCCTAT GGCGATGATG GCAATCTGGC CGACTATGCC
AATGGCACCT ATACATGGCG CGCTTACGGC GGCAGCTCCA CTGGAACCAC CGTTACCAGT
ACCCGCGACA GGGGGCACGA CATGTGGCAT GCAGCCCTCA ACGGCCGGGG ACGCTTCTAC
GCCGTGGAAA AGGGTGAAGA TCTGAAAGAG GCATTCAGGC AGATCGTGCG CACCATCAAC
GCCGAAACCG AGCCAGACCG TGGCTCCACC GCCACCAGCG GCAGCAACGC ATCACAGAAC
GACGTGGGTA TCTTCACTGC CAGCTACGTA CCCAAGGAGG GCTGGCGGGG CGCCGTATCG
TCCGAGACTT TCAAGAGCGA CGACGGCACC ACCGTGCAAG CCTGGGACGG CAAGACCACG
GCCGACAAGC TGGACGACAC AGCTTTCAAC GTGACCAACC GCCTGGTATT GACCTGGAAT
GACGACATCC CCTCCGGAAG TACGGCAGAA GTGGGCGGCA GGCCGTTCAA GTGGACCAGC
GGCAATACCA ACCTAAGCGC GGACCAGAAG GTCCTGCTGA CCGCCACCGG CACGAATGGC
GGCCCCTCGG GCACTGCTGG CGCCGATGGA AACAACCGTG TGAACTACCT GCGCGGCGTG
CGCGATCTGG AGTGCCCCGA CGCTGGCTGC ACGACCGACA AACCTTTCCG CAAGCGCTGG
AGCCGCCAGG GCAGCATCAT CAATTCCGAG GTGTGGTACC TGGGCGCACC TACAAGCAAT
TACGCCCTGG AGGGCTACAC CGCCTTTACA CGCACCTGGG CCAAGCGCGA GCCCATGCTC
TATGTGGGCG GTAATGACGG CATGCTGCAC GGCTTTACCG CCGCGGACGG CACGGAACGC
ATCGCCTACG TGCCCCGTGG CGTGATGCGC GACCTGCCCA AGCTCACCAA CCCGACCTTC
AACAACAATC ACCAGTACTT CGTCGATGGC TCTCCCATGA CGGGCGATGT GTTCGACAGC
GAGTGGAAGA CCCTGCTGAT AGGCACGCTG GGCGCGGGTG GCCGGGGCTA TTTTGTGCTG
GACGTGACCA ACCCCGGCAA GACGGACGGC ACAGGCAGCA GCAACTTCAC CGAAACCAAT
GCGAACAGCC TGGTGGTGAT GGACAAGACC CTCCCCGCCA GCACCACCAC CGCGAGCAAT
GACGACGTGG ACGACCTGGG CCATATCTTC GCCAAGCCGG TGATGGACGA TGCCAACCCG
CAACGCACCA CGCAGATCGT GCGCATGAAC GACAACCGCT GGGCCGCGGT GATGGGCAAT
GGCTACAACA GCGCCAACGG ACGGCCCGTG CTGCTGATCC AGTATCTGGA CGGCGCCAAG
GAGCTGCTGC GCATCCCGGC CCTGACGACG GACACGGACA ACGGCCTGTC GGCCCCCCGC
CTGGTGGACA TCAGCGGCGA TGGCCGGCCA GACGTGGTGT ACGCGGGCGA CCTCAAGGGC
AACCTGTGGA AGTTCCTCAT CAACACCGAA GATGCCAGCC AATGGGGCGT AGCAACTTGG
GAAGGCAAGG CTGCCGGCAC ACCGCTGTTC ACGGCCAATC GCGGCACGGG ACATTCGGCC
AACACGAACA GCTCCACGCG GCAGTCCATC ACCGCTGCCC CCTCAGCGCG GGTGAACGAC
CGTACCAAGA CCACCGGCAC CGGCACCAGC GCCGTGACCG GTGCCGTGGG CGGCATGATG
GTGGCCTTCG GCACCGGCCG CAACGTGACC AAGTTGGACC AGGCAGAACT GCAGCAGCAG
ACGCTGTACT CCGTGCTGGA CAACACGCGC TACGAGCGCG AAATGACCGG CACCGCCCCC
AACGAGAAGC CGACTGGCCG CGTGAAGGTA TGTGCCACCA CTACCGGCGT CTGCGCCAAG
CTGGTGAAAA GCAGCGACGA CCTGCCCCAT GCCGTGGCCC AAAGCGACTT GGTGCAGAGC
ACGATTCCCG ACACAGCCGC ACAGACGCGC GACGGCAGGA GTTTCTGGAA GCTGAATGCC
TCTACCTTGA ATTGGGCCGA CAAGAAAGGC TGGTTCATGG ACTTTCCCCT GACCCGCGAA
CGCCTGCTCA AGCCCATGCA GTTCTACGAC GGCAGCAACC TGTTGATGGT GCCCACGCAA
ATTCCCGCCA AGGGATCGCG CCTGGACCCC GCAATCGAAA GCTGCGAAGG CGGTGCAGTT
GACAAGGAAA GCCAGTACGT GACGTTCATC AACATCATGG ACGGCCAAGC ACCTCGCGTT
CCGATCATTG ACGGACCGAA CGGCCTTGCC CGCTACGGCA TGCCGCCGGG TGCCCTGACA
ATGATCGTAA AGGGCAATCG CATCCACATG CGTGGCAGAC AGCCGAAGCA AGGCGGGACG
GGCTCGGACC TCGTCGAGGA AAAGATGCGC CGCATGCCGG AAATGTCCTT GCGCCCGAAT
TGGCGCCAAC TGAAATAA
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| Protein sequence | MTFHAPSHTR FKKTLLASLI GAALAPHTAL ALDFAQAPPG TVEPYVAPNV ILSLDDSGSM
NTADMTLPGV LRDPSRPYCN RTGGCSGGNA YNPWVTAPQT LTRTKVLADA LKDTFSDTAL
LPNGKIRMAW QSMNNSTTGS GLTLSDLGTA AATNGTSHNM MRVLDATHRA NFIAYANKYS
ASGNTPTHRM VQRADDYMRA TPHQNGPWAD VPGTKLADAK NDNKPLGCRR NYHILLTDGG
WNQYVQSTTP LNYDNRTSPD LPNGKPYTAT AQTRLYRDSE DFTTIADWAF QSWANPLRPA
TDLHGKVSPL PEYDNAPASE TITNRVTKTT ATLEKFWNPK YDPADWAHMV TFTIGFSTDA
LPQKNYSLNK DGTSVTDQGA ITAPTTLLPY GDDGNLADYA NGTYTWRAYG GSSTGTTVTS
TRDRGHDMWH AALNGRGRFY AVEKGEDLKE AFRQIVRTIN AETEPDRGST ATSGSNASQN
DVGIFTASYV PKEGWRGAVS SETFKSDDGT TVQAWDGKTT ADKLDDTAFN VTNRLVLTWN
DDIPSGSTAE VGGRPFKWTS GNTNLSADQK VLLTATGTNG GPSGTAGADG NNRVNYLRGV
RDLECPDAGC TTDKPFRKRW SRQGSIINSE VWYLGAPTSN YALEGYTAFT RTWAKREPML
YVGGNDGMLH GFTAADGTER IAYVPRGVMR DLPKLTNPTF NNNHQYFVDG SPMTGDVFDS
EWKTLLIGTL GAGGRGYFVL DVTNPGKTDG TGSSNFTETN ANSLVVMDKT LPASTTTASN
DDVDDLGHIF AKPVMDDANP QRTTQIVRMN DNRWAAVMGN GYNSANGRPV LLIQYLDGAK
ELLRIPALTT DTDNGLSAPR LVDISGDGRP DVVYAGDLKG NLWKFLINTE DASQWGVATW
EGKAAGTPLF TANRGTGHSA NTNSSTRQSI TAAPSARVND RTKTTGTGTS AVTGAVGGMM
VAFGTGRNVT KLDQAELQQQ TLYSVLDNTR YEREMTGTAP NEKPTGRVKV CATTTGVCAK
LVKSSDDLPH AVAQSDLVQS TIPDTAAQTR DGRSFWKLNA STLNWADKKG WFMDFPLTRE
RLLKPMQFYD GSNLLMVPTQ IPAKGSRLDP AIESCEGGAV DKESQYVTFI NIMDGQAPRV
PIIDGPNGLA RYGMPPGALT MIVKGNRIHM RGRQPKQGGT GSDLVEEKMR RMPEMSLRPN
WRQLK
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