| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2537 |
|---|
| Symbol | |
|---|
| ID | 7384808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2699440 |
|---|
| End bp | 2700351 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643655845 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002553972 |
|---|
| Protein GI | 222111708 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4966] Tfp pilus assembly protein PilW |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACACC TCACCCACCT CGCCCCTCGC CGCCCGCAAC GCCAGCGTGG CGTAACCCTC
CTTGAGCTGA TGGTCGGCGT CGTCATCGGC CTGCTCACCG TGGCCGTTGC CATGGGTGCG
CTCATGGTCT CGCGCGGCAT CAGCGGCACG GTCAGCGACG CCAGTGAAAT CCAGCAGCAG
GGCACCTACG CCATGCGCGT GATCGGCCAA CAAATGCGCC AGGCGGGCTC GCTCAAGCTC
GACCTCATCC CCGCAGCTGC CCAAGCTGCC GCCGCCAGCA ATGCCTTCGA CCACCTGCTG
CCGGTAGCAT TGGAAGCCAG GGCCGACCCT GCCGCAGGCA TCTCGGGCGA CCCCGGCTGG
GCCCCCGCCA CCGACACCAT CGGGTTCCTG AATGGCGGCC CCGTCGTCGG CTTTGCCAAC
GACACAACAG AAGTTCTCAC GACCGGCACC GGATCCCCCC CCACAGGTTC GCAAACCGCC
AACTGCCTGG GCCAGCAACC AAGCGGGGCC GCCACGCGCA GCAACTTCTT CCTGGCAAAC
GGTGAACTTC GATGCGGCAG CGGCATAGTT AACGACAACC AGCCCATCGT GCGTAACGTC
GCCGCCTTCC AGGTGCGCTA TCTGATGCAA GACATCACAA CCACTCCCGG CATCCCCCAG
ATTAACTACG CCGCCTCCAA TGCCACCGTC GAAGCCGTTG CCAACGGCTG GGCCAAGGTG
CAAGCCGTCG AAGTCTGCCT GGAGCTGTTC GGCAACGAAG CCATTGACCT GCCAGCGGGC
AGCACCTACA CGGGCTGCGC CGGCCCGGTC GCCTACGACA CCCTCACGGG CGCCCGCGCG
CGGCGCATGC ACCTCACTTT CCGCAACGTC TTCCAGTTGC GCGGCCAGGG CCAGACCGGC
GCCGTGCTCT AA
|
|---|
| Protein sequence | MTHLTHLAPR RPQRQRGVTL LELMVGVVIG LLTVAVAMGA LMVSRGISGT VSDASEIQQQ
GTYAMRVIGQ QMRQAGSLKL DLIPAAAQAA AASNAFDHLL PVALEARADP AAGISGDPGW
APATDTIGFL NGGPVVGFAN DTTEVLTTGT GSPPTGSQTA NCLGQQPSGA ATRSNFFLAN
GELRCGSGIV NDNQPIVRNV AAFQVRYLMQ DITTTPGIPQ INYAASNATV EAVANGWAKV
QAVEVCLELF GNEAIDLPAG STYTGCAGPV AYDTLTGARA RRMHLTFRNV FQLRGQGQTG
AVL
|
|---|
| |