| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2535 |
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| Symbol | |
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| ID | 7384806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2698123 |
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| End bp | 2698704 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643655843 |
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| Product | putative type-4 fimbrial pilin related signal peptide protein |
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| Protein accession | YP_002553970 |
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| Protein GI | 222111706 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCCA CAGCCACAAC TGCCTTGCCC ACCCGCCGAG TAACCGTTAG GGGGTTCACG
GCCATCGAGC TCATGGTCAC CGTTGCCATC CTGGGCGTTC TTGCCGCACT GGCGGCGCCC
AGCTTCGCTG CTGTCGCTGA GCGCTGGCGC ATTATGCAAA CCACCGAATC GCTCAAGTCC
ACGCTGTACT ACGCTCGCTC CGAGGCGATC AAGCGTGGCG GCAGTATCGC CATCCAGAAA
CTGGCCAATG GCACCAACGG CTGCACCACC GCCAGCGGCA CCAGGGACTG GGGCTGCGGC
TGGTACGTCT GCGCGGACAC CAACGGCAAC GGCACATGCA ACGCCAGTGA ACCCGTGCTG
CAGCGCTACG ACACCCCTGC CAACGTAGAA GTCACCCGCA CCGGCGGCGG CACCAGCATC
AAGATCAACC GCTGGGGACT GGTCAGCGGC ACCTGGCTGG GCTTCAGCAT CGTCCCCAAA
GACCAGTCCA CGAACCACCC CGCCGCGCGC GGCGTCTGCA TGAGCTCTGG CGGACGCATC
CGAGTCATTC CCCCCGAGGA CATTCCATGC CGCAACAACT GA
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| Protein sequence | MRATATTALP TRRVTVRGFT AIELMVTVAI LGVLAALAAP SFAAVAERWR IMQTTESLKS
TLYYARSEAI KRGGSIAIQK LANGTNGCTT ASGTRDWGCG WYVCADTNGN GTCNASEPVL
QRYDTPANVE VTRTGGGTSI KINRWGLVSG TWLGFSIVPK DQSTNHPAAR GVCMSSGGRI
RVIPPEDIPC RNN
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