| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1747 |
|---|
| Symbol | |
|---|
| ID | 7385311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1856003 |
|---|
| End bp | 1857016 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643655063 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002553204 |
|---|
| Protein GI | 222110940 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCCG CGACAAAAAC CTTTGCCTCG ATCGTGAATC GCCGGCAGGC CGAGCCCCAG
GCGGGGGAAA TGACGGCCCT GCTGCTGGAC CGGCTGGCGC ACGGTGGGGC TTTGAGCGGG
CCCGAGCAGG CCGTCGGCGG TTCCGTGTTC AACGGCACGT TGTCCCTGGC CGAACTGCGC
GACGGGTTCT TCCTGCACCG CACGGACATC GCGTACCTGC GTGGCTTGAC CAGCCGCTTC
CCGCTGACCA AGAGCGGGAT CAAGATCGTG CTCAAGCTGC AGGGCGGCGG CAGGCTGCGC
ATCGGCCCCC TGGTCCTGCC GGTGGAGGTG CCCCCGGGCG GGGGTGCCCG GGCGGCGGTG
GTGGCACTGC GCGGGCCGGC GCCGTACGAG CACCGCTGCC GCGCGCCGTC GCGCGAGCGC
ATGCTGGTTC TCACGCTGGC GCCGCACTGG CTGGACAAGG CGGGGCTGGG CCACCTGAAT
GCGCTGCCCC ACCTGACCAT GACGGCGTGG GCGCCTTCGC CCAGGGCGGT GTGCGTTGCC
GAGCAGTTGT TGGCAGAGGG CCAGGTGCAG TACGGGCCGC TCAGGGGGCT GCAGCAGGAG
TGCCTGACGC TCGAACTGGT CATCGAGGCG CTGGCGCAGT GGGTCGCGCC CGCCAATTCC
GCCGCCGCAT GCGAGGCAGC CGGATTGCGG CCAACCGCGT ACCAGCGGGC ATGCCATCTG
CGCGACTGGC TCGACAGCGG CGCCGCTGAC TCCCTCACCA TGGGCGCAAT CGCGCGACAC
ATGGGCTGCA ACGCCAGCAC CCTGCAAACG CAGTTCCGCC AGGCATTCGG CAAGCCCATC
TTCGAACACT TGCGCGAAGG CCGCTTGCGC AGGGCGGCCG ATGCCATCAC GGCACAGGGC
ATCACCGTGG CGCAGGCGGC GGACTTGGCG GGCTACCGCA GCCCTGCGAA TTTCTCCACC
GCCTTTCGCC GGCTCTACGG CTTTTCGCCC AAGAATCTCC GCGCGAAGCG GTGA
|
|---|
| Protein sequence | MFAATKTFAS IVNRRQAEPQ AGEMTALLLD RLAHGGALSG PEQAVGGSVF NGTLSLAELR
DGFFLHRTDI AYLRGLTSRF PLTKSGIKIV LKLQGGGRLR IGPLVLPVEV PPGGGARAAV
VALRGPAPYE HRCRAPSRER MLVLTLAPHW LDKAGLGHLN ALPHLTMTAW APSPRAVCVA
EQLLAEGQVQ YGPLRGLQQE CLTLELVIEA LAQWVAPANS AAACEAAGLR PTAYQRACHL
RDWLDSGAAD SLTMGAIARH MGCNASTLQT QFRQAFGKPI FEHLREGRLR RAADAITAQG
ITVAQAADLA GYRSPANFST AFRRLYGFSP KNLRAKR
|
|---|
| |