| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1696 |
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| Symbol | |
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| ID | 7385260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1800744 |
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| End bp | 1803236 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643655012 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_002553153 |
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| Protein GI | 222110889 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0628] Predicted permease
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGG ACAACGCCAT GGGCAACAGC GGGCCGCAGG AGCCGACCGA TTCCAGGCCG
GCCAGGGATA CGGGGGCGGC GCGCGGCGCC ACCGCTTCGG GCTATCCGCC GCAGCGCACC
GTGCACACCG CCACGGCCTT GGACGCCACG GTGCCCAGCC TGCGGTTCAT GATCGGCCTG
GTGATCGCGG CGCTGGTGGT CGCGGGCCTG TATTTCGGCC GCACGCTGCT GGTGCCGCTG
GCATTGGCGT TCCTGCTGAG CTTCGTGCTG GAGCCGCTGG TGGCGCAGCT CAAGCGCATG
GGCCTGCCGC GCCTGCCCTC GGTCATCGCG GTGGTGATGG CAATGCTGAT GGTGCTGGGC
GTGGGGGCGC TGTTCGTGGG TAACGAGGCG CGCGAGCTGA GCGCGCAGCT GCCCTCCTAC
CAGAGCACCA TCCGCAAGAA GCTGCGCAGC CTGCGTCAGG AGTTGCGCGC GCCCGGCATG
TTCGACGGCG CCAAGCGCAC CTTCGACATC GTGCAGCGCG AGGTGGAGGC GGCCGCTCCC
GCCTTGTCGG GTGCCACGCG CGCGCCGGCC GTGCAAAAGG TGCAGGTGCA GCCGCCCGTG
CTGTCGCCCG CCAACCAGCT CATGGCCGCG CTCTCGGCGG TCAGTGGGCC GCTCACCCAG
GCGGGCCTGG TGCTGGTGTT CGTGATCTTC ATCCTGCTGG ACCGTGTAGA CCTGCGCGAC
CGCCTGCTGC GCCTGTGGGG GGGCAATCTG CACCGCGCCA CCGATGCCAT GGACGAGGCG
GGCGACCGCA TCACGCGCTA CCTGACCATG CAACTGCTGG TGAACGTGAC CTACGGCATT
CCCATGGCGG CGGGCCTGTG GCTCATCGGC GTGCCCGGTG CCGTGCTGTG GGGGTCGCTG
GCCGCGGTGA TGCGCTTCGT GCCCTACCTG GGGCCGTTCA TCGCTGCGGC GTTTCCGCTC
ACCCTCGCTT TCGCGGTGGA CCCGGGCTGG GATCTGGTGC TGTGGACGCT CGGCCTCATC
GTGCTGCTGG AACTGGTGAG CAACAACGTC ATCGAGCCCT GGCTGTATGG GTCCAGCACC
GGGCTGTCGG CGCTGTCGCT CATCGTGGCG GCCACCTTCT GGGCGGCGCT GTGGGGGCCG
GTGGGGCTCA TCATGTCCAC GCCGCTCACC GTGTGCCTGC TGGTGATCGG CCGCTACCTG
CCGCAGTTGG CCTTCCTGGA GGTGCTGCTG GGCAGCCGGC CGGTGCTGGA CGAGCCCACG
CGCATCTACC AGCGACTGCT GGCGGGCGAC GCGGCGGAGG CCATCGAGCT GAGCACCACC
CGCATCGAGG CCCTGAAGGG CGCCGTGCCC GCTTTCTACG GCCAGGTGGG CGTGCCCGTG
CTGCGCATGG CCGTGGGTGA CCATGCGCAG GTGGCCACGC CCGAGCACCG CCTGCGCCTG
GTCGAAGGCA TGGACGCGCT GCTGGACGAG TTGGAGGAGC AGTACCCGGT GCCCGACGCC
GCTGCGCAAG AGCCGGTGGT GTGCCTGGGC GGCAAGTGGG AGGTAGACCT GTTCGCGGCG
CGCATGCTGG CGCATGCGCT GTCGCTGCAG CATTGCCCGG CGCTGGCGCG CGTGGAGGGC
GCCATGAGCG CCGAACATCT GGATGGCCTG GACCTGGACG CCGTGCGCGT GGTCTGCGTG
GTGTGGCTCG CGCCCGAGCC CACCGCCGCC GCGCGGCACC TGTGCCGCAG GCTCAAGCGC
CGCTGGCCGC ATGTGCACAT CGTGCTGGCG CTGTGGGGTG GGGTGCAGTC CCAGCCGCAG
GACGAGCTGA GTGCCCAACT GGGCGCCGAC GCGCTGGCGC TGTCGCTGGA GGAAACCCTG
GCCCAGGTGG CGCAGCTGCA GGGCGCCAGC GTGGAAGGCG CCTACACCCC CGCGCCCATT
CCCGCGGACG ACGAGGCGCG CCTGCGCGCC CTGCAGGCCA GCGGCGTGCT CGACAGCCCC
GCGCTGCAGC AGTTGTGCCA GCACACGGCC CAGCGCGCGG CCGACATCTT CGACGTACCG
TTGGCGATGG TGTCGCTGGT GGATCGCGAG CGGCAGGTCA CGCTGTGTGC GCACGGCCCG
TTGGCGGCCG GCGGGGGGCA GGCCTGCTCG GCGGGTCAGG GCCTGCCGCG CGGCCTGTCG
CTGTGCGGGC ATGTGGTGGC GCGGCAGCGG TCGCTGGTGG TGCTCGACAT TGCGCGGGAT
GCGCGCTTTG CCGGCAATCC GGCGCTGCGC GAGCAGGGTC TGCGCTTTTA CGCGGGCGTT
CCGCTGCGCG ACGCGGCGGG CCATGCGCTG GGCACGCTGT GCCTGATGGA CACCGCGCCG
CGCGCGTTCG ATGAGCGGGA AAAGCGGTTG CTGCAGGCCA TGGCCAATGA CCTCATGGCT
GGCTGGCGCG ACGCCCAGGC CGCGGGCGGC CCGGCGCTAC CCGCGGGCCA GGCCGCGCCA
TCGGCCACGG TGGGTCAGGT GGTGCCGCAG TAG
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| Protein sequence | MQGDNAMGNS GPQEPTDSRP ARDTGAARGA TASGYPPQRT VHTATALDAT VPSLRFMIGL
VIAALVVAGL YFGRTLLVPL ALAFLLSFVL EPLVAQLKRM GLPRLPSVIA VVMAMLMVLG
VGALFVGNEA RELSAQLPSY QSTIRKKLRS LRQELRAPGM FDGAKRTFDI VQREVEAAAP
ALSGATRAPA VQKVQVQPPV LSPANQLMAA LSAVSGPLTQ AGLVLVFVIF ILLDRVDLRD
RLLRLWGGNL HRATDAMDEA GDRITRYLTM QLLVNVTYGI PMAAGLWLIG VPGAVLWGSL
AAVMRFVPYL GPFIAAAFPL TLAFAVDPGW DLVLWTLGLI VLLELVSNNV IEPWLYGSST
GLSALSLIVA ATFWAALWGP VGLIMSTPLT VCLLVIGRYL PQLAFLEVLL GSRPVLDEPT
RIYQRLLAGD AAEAIELSTT RIEALKGAVP AFYGQVGVPV LRMAVGDHAQ VATPEHRLRL
VEGMDALLDE LEEQYPVPDA AAQEPVVCLG GKWEVDLFAA RMLAHALSLQ HCPALARVEG
AMSAEHLDGL DLDAVRVVCV VWLAPEPTAA ARHLCRRLKR RWPHVHIVLA LWGGVQSQPQ
DELSAQLGAD ALALSLEETL AQVAQLQGAS VEGAYTPAPI PADDEARLRA LQASGVLDSP
ALQQLCQHTA QRAADIFDVP LAMVSLVDRE RQVTLCAHGP LAAGGGQACS AGQGLPRGLS
LCGHVVARQR SLVVLDIARD ARFAGNPALR EQGLRFYAGV PLRDAAGHAL GTLCLMDTAP
RAFDEREKRL LQAMANDLMA GWRDAQAAGG PALPAGQAAP SATVGQVVPQ
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