| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1416 |
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| Symbol | |
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| ID | 7382669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1483033 |
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| End bp | 1485600 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643654733 |
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| Product | helicase c2 |
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| Protein accession | YP_002552879 |
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| Protein GI | 222110615 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCCG CCCCGCGCCC CCACGTGGTG GCCGTGCGCG CGCTGTGCGA GTTCACGGCC
CGCACGGGTG ACCTGGACCT GCGCTTCACC CCCGCCCCCA GCGCGCTCGA AGGCATGGAA
GGCCACCGTG CGGTGCAGCA GCGCCGCGGC GCAGGCTACG AGGCCGAAGT GCCGCTGAGC
GGCACGTACG ACCACCTGAT GGTGCGCGGC CGCGCCGATG GCTGGAACGC GGCGCTGGGG
CAGCTCGAAG AAATCAAGAC CTACCGCGGC ACGCTGGACA GCGTGCGCCC CCACCACCGC
GCGCTGCACT GGGCCCAGGC CCAGGTGTAC GGCCACCTGC TGTGCCAGGC GCGCGGGTTG
GCGGGGCTCA AGCTTGCGCT GGTCTACGTG CACGCCACCA CCCATGCCGA GACCGTGCTG
GTGCAGGAAC ACACCGCCGC CGCGCTGCAG GCGTTCTTTG CCACGCAGTG CCAGCGCTAT
CTGGCCTGGG CGCACAGCGA GGCCGCGCAC CGCCAGCAGC GCAACGCCGC CCTGGTGCGG
CTGCGCTTTC CGCTGCCCGC ATTCCGCGCC GGGCAGCGCG AGCTGGCCGT GGCCGTGTAC
CGCACCGCAC ACCCCAACGC AGAGGGCGCC AGCGCCCCCG CCGGGCGTTG CCTGCTGGCC
CAGGCGCCCA CCGGCATCGG CAAGACCCTG GGCACGCTGT TCCCGCTGCT CAAGGCTATG
GCGCCCCCGG CCACGGTACC CCCGGCGATG ACCACGCAAG GGCAGGGCAG GCCGGCTCCG
GCCGCTGCCG CATCCGGCGC CGCCGCCGAT GCGGTGGCCA GAGGGGACAA GGAAGCCATC
AAAAAAGAGA GCGCGTCACG CTTGCCCAGT GGCCTGGACA AGCTGTTTTT CCTCACCGCC
AAGGGCACGG GCCACGGCCC GGCGCTGCAC GCGCTGGCCC AGTTGCAGGG CGCGCTGGCA
CCCCACGCGC CCGGCACGCC GCTGCGCGTG CTGGACCTGC ACGCGCGCGA CAAGACCTGC
GAACACCCCG GCAGCGCCTG CCATGGCGAT GCCTGCCCGC TGGCGCGCGG CTTCTTTGAC
CGGCTGCCCG CCGCCCGCGC CGCCGCCGTG CAGCAGCCCG CGCCGTGGGA TGCACCCGCC
GTGCGCAGCG TGGCGCTGCA GCACGGCATC TGCCCCTACT ACCTGTCGCA AGAGCTGGTG
CGCTGGGCCG ACGTGGTGGT GGCCGACTAC CACTACTACT ACGACAGCGC CGCCATGCTG
TACGCCCTCA CGCAGCAGCA GGGCTGGCGC GTGGCCGTGC TGGTGGACGA AGCCCACAAC
CTGCTGGAGC GCGCACGCAG CATGTACACG GCGCCGCTCT CGCCCTTCGA GCTGGCCGCC
GCACGCCAGA CCGCCACCGG TCCCGTCAAG AAGGCGCTCG ACGCCTTGCA CCGCCAGTGG
AACGCGCTGA GCAAGACCCT GGGCCAGAGC GTAGAGGACG CTGACACGCC GGGCGCACCC
GGCGCACTGC ACACCGGCGC CACCGCACCC GCGCACCCCC TCGCCGCCAC GCCCACTTAC
CAGGCCCACG CCACCGTGCC GCCCGCGCTG CTGGGCGCCG TGCAGCGCGC CGTGGGCGCC
ATGGCCGAGG CCCAGGCCGA CCAGCCCCTG CCGCCGGGCG ACGCGGTGCT GGCGTTCTAC
TGGTCGCTGC TGCACTTCCA GGCCCTGGCC GAGCAGTTCG GCCCGCATGC GCTGTTCGAC
CTGCAGCACA CCGCCACGCC ACCGCGCAGC CGCAGCGGCC GGGCCCGCAC ACCCGCCACC
ACGCTGAGCA TCCGCAACGT CATGCCCGCA CCGCACCTGG CGGCGCGCCA CGCGGCAGCG
CAGGCCACGG TGCTGTTCTC GGGCACGCTC AGCCCGCCGC AGTTCTACCG CGACCTGCTG
GGCCTGCCGC CCGACACCGT CTGGCTGGAC GTGGCCGCCC CCTTTGCCGC CCACCAGCTG
CAGGTGCGCG TGGCCCCGCA CATCTCCACC CGCTGGCGCG ACCGCGAGGC CTCGCTCGCC
CCCATCGCCG ATCTGGTGGC CGCGCAGTAC GCGCACCAGC CCGGCAACTA CCTGTGCTTT
GCCAGCAGCT TCGACTACTT GCAGCGCCTG GCCGCCACCC TGGCCCAGCG CCACCCGCAG
GTGCCCCAAT GGCAGCAAAC GCGCGAGATG GACGATGCCA GCCGCGCCGC CTTCCTCGCC
CGCTTCACCG AGGGCGGCCA GGGCGTGGGC CTGGCCGTGC TGGGCGGCGC CTTTGCCGAA
GGCGTGGACC TGCCGGGCAC CCGCCTCATC GGCGCCTTCA TCGCCACGCT GGGCCTGCCG
CAGGTGAACG CGGTGAACGA CGCCATGCAA TGTGCGCTGG ACGAGGTGAT GGGCCCCGGC
CAGGGCTATG CCTGCACCTA CCTCTACCCC GGCCTGCGCA AGGTGGTGCA GGCCGCCGGC
CGCGTGATCC GCACCGAACA GGACCGGGGC GTGGTGGTGC TGATGGACGA CCGCTTTCAG
CGTGCAGAGG TGCGCGCGTT GTTGCCACGG TGGTGGCAGG TGGGGTGA
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| Protein sequence | MTAAPRPHVV AVRALCEFTA RTGDLDLRFT PAPSALEGME GHRAVQQRRG AGYEAEVPLS
GTYDHLMVRG RADGWNAALG QLEEIKTYRG TLDSVRPHHR ALHWAQAQVY GHLLCQARGL
AGLKLALVYV HATTHAETVL VQEHTAAALQ AFFATQCQRY LAWAHSEAAH RQQRNAALVR
LRFPLPAFRA GQRELAVAVY RTAHPNAEGA SAPAGRCLLA QAPTGIGKTL GTLFPLLKAM
APPATVPPAM TTQGQGRPAP AAAASGAAAD AVARGDKEAI KKESASRLPS GLDKLFFLTA
KGTGHGPALH ALAQLQGALA PHAPGTPLRV LDLHARDKTC EHPGSACHGD ACPLARGFFD
RLPAARAAAV QQPAPWDAPA VRSVALQHGI CPYYLSQELV RWADVVVADY HYYYDSAAML
YALTQQQGWR VAVLVDEAHN LLERARSMYT APLSPFELAA ARQTATGPVK KALDALHRQW
NALSKTLGQS VEDADTPGAP GALHTGATAP AHPLAATPTY QAHATVPPAL LGAVQRAVGA
MAEAQADQPL PPGDAVLAFY WSLLHFQALA EQFGPHALFD LQHTATPPRS RSGRARTPAT
TLSIRNVMPA PHLAARHAAA QATVLFSGTL SPPQFYRDLL GLPPDTVWLD VAAPFAAHQL
QVRVAPHIST RWRDREASLA PIADLVAAQY AHQPGNYLCF ASSFDYLQRL AATLAQRHPQ
VPQWQQTREM DDASRAAFLA RFTEGGQGVG LAVLGGAFAE GVDLPGTRLI GAFIATLGLP
QVNAVNDAMQ CALDEVMGPG QGYACTYLYP GLRKVVQAAG RVIRTEQDRG VVVLMDDRFQ
RAEVRALLPR WWQVG
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