Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1304 |
Symbol | |
ID | 7382393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1363010 |
End bp | 1364782 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643654623 |
Product | ABC transporter related |
Protein accession | YP_002552769 |
Protein GI | 222110505 |
COG category | [G] Carbohydrate transport and metabolism [V] Defense mechanisms |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGGCAG ACACCGCCAT GGCCGCCACG CCGGCAAGCG CTGTCGCCGC TGCCGCCGTC GTCATCGAAG GGGTGGACAA GCATTTCGGC AAGGTGCAGG CCCTGCGCAG CTTGAGCGCG CACATCCACT ACGGACGGCT GACGGGCCTG GTCGGCCCGG ACGGCGCCGG CAAGACGACG CTGATGCGCA TTCTGACCGG CCTGCTGGTG CCCAACGCCG GTCGCGTCAC CCTGGCTGGC TTTGACGTGG TCAAGGACAA CGACGCCATC CATGTCGCCA GCGGTTATAT GCCGCAGCGC TTCGGCCTGT ACGAAGACCT GTCGGTGATG GAGAACATGC GCCTGTATGC GCAGCTGCGC GGCATGGACG CGGATCGCAA TGCCGATCTG TTTGCCGAGT TGCTGGACTT CACGCGGCTT GGGCCCTTTA CCAAACGCTT GGCCGGCAAG CTCTCCGGCG GCATGAAGCA AAAGTTGGGG CTGGCCTGTG CGCTGATGGC GCGGCCCAAG GTGCTGCTGC TGGACGAGCC CGGCGTGGGC GTCGATCCGG TCAGCCGGCA GGATTTGTGG CGCATGGTGC AGGCACTGAC CGATGAGGGC ATGGCCGTGG TCTGGTCCAC CGCCTACCTC GACGAGGCCG AGCGCTGCGA GAGCGTGCTG CTGTTGAACC AGGGGCAGCT CCTGTTCGAT GGTCCACCGC AGCAACTCAC CGCGCAACTT GAAGGCCGCA GCTTTCGCCT GGAAAACGTC GGCGCCGAGC GCCGCGCGGT TCTGACCGAG GCACTCGATC TGGAGAGCGT GAGCGACGGA GTGATCCAGG GCGCCGGCGT GCGTGTGGTA CTGCGGGACG GTGCGCAGGC AAGCCAAATC CAGTCGCTGG CTGATCGTGC GCGCGTAGCG CTGGCCCCGG TGCCCGCACG CTTCGAAGAC GCTTTCATCG ATTTGCTTGG CGGCGGCCCC GGCGGTACTT CGACACTGGC CGAGCGCCTG CCACCAGTCG AGCTGGGTTC GGACGTTGCC GTGTCCTGCC GCAACCTCAC GAAACGCTTC GGCGAATTCA CCGCCACCGA CAACGTCAGC TTCGAGGTGC AAAAGGGCGA AATCTTCGGT CTGCTCGGCC CCAATGGCGC CGGCAAGTCC ACCACCTTCA AGATGCTGTG CGGCCTGTTG AAACCCACTG CTGGTGAAGC GCATGTGGTG GGCCATGATC TGCGCCGCGC CACCGGTGCA GCCAAGGGCC GGCTCGGCTA CATGGCGCAG AAATTCTCGC TCTACGGTCT GCTGTCGGTG CAGCAGAACC TGGAATTTTC GGCCGGCGTT TACGGGCTGG AAGGCAACAC CCGGCGCGAG CGCATTGCCG AGATGATCGA GACCTTCGAT CTGGGGGAGT GGCTGTCCGC CACGCCCGAT TCCCTGCCGC TGGGGCACAA GCAGCGCCTG GCGCTGGCCT GCTCGCTCAT GCATCGGCCA CCCGTGCTGT TCCTCGATGA GCCTACTTCG GGCGTGGACC CGATCACCCG GCGCGAGTTC TGGACCCACA TCAACGGCCT GGCGCGCAAG GGCGTGACCA TCATGGTCAC CACCCACTTC ATGGACGAGG CCGAATACTG CGACCGCGTC GCCATGCTCT CGCGCGCACG CCTGATCGCG TTGGACACGC CCGATGCGCT CAAGCGCGCC GCAGCCAATG TCGAACACCC CGACCCGACC ATGGAGGACG CCTTCATTCA CCTGGTGGAA TCTGCCGACC GCGAGATGGA GGCCGCCGCA TGA
|
Protein sequence | MQADTAMAAT PASAVAAAAV VIEGVDKHFG KVQALRSLSA HIHYGRLTGL VGPDGAGKTT LMRILTGLLV PNAGRVTLAG FDVVKDNDAI HVASGYMPQR FGLYEDLSVM ENMRLYAQLR GMDADRNADL FAELLDFTRL GPFTKRLAGK LSGGMKQKLG LACALMARPK VLLLDEPGVG VDPVSRQDLW RMVQALTDEG MAVVWSTAYL DEAERCESVL LLNQGQLLFD GPPQQLTAQL EGRSFRLENV GAERRAVLTE ALDLESVSDG VIQGAGVRVV LRDGAQASQI QSLADRARVA LAPVPARFED AFIDLLGGGP GGTSTLAERL PPVELGSDVA VSCRNLTKRF GEFTATDNVS FEVQKGEIFG LLGPNGAGKS TTFKMLCGLL KPTAGEAHVV GHDLRRATGA AKGRLGYMAQ KFSLYGLLSV QQNLEFSAGV YGLEGNTRRE RIAEMIETFD LGEWLSATPD SLPLGHKQRL ALACSLMHRP PVLFLDEPTS GVDPITRREF WTHINGLARK GVTIMVTTHF MDEAEYCDRV AMLSRARLIA LDTPDALKRA AANVEHPDPT MEDAFIHLVE SADREMEAAA
|
| |