Gene Dtpsy_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1304 
Symbol 
ID7382393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1363010 
End bp1364782 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content66% 
IMG OID643654623 
ProductABC transporter related 
Protein accessionYP_002552769 
Protein GI222110505 
COG category[G] Carbohydrate transport and metabolism
[V] Defense mechanisms 
COG ID[COG1129] ABC-type sugar transport system, ATPase component
[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAG ACACCGCCAT GGCCGCCACG CCGGCAAGCG CTGTCGCCGC TGCCGCCGTC 
GTCATCGAAG GGGTGGACAA GCATTTCGGC AAGGTGCAGG CCCTGCGCAG CTTGAGCGCG
CACATCCACT ACGGACGGCT GACGGGCCTG GTCGGCCCGG ACGGCGCCGG CAAGACGACG
CTGATGCGCA TTCTGACCGG CCTGCTGGTG CCCAACGCCG GTCGCGTCAC CCTGGCTGGC
TTTGACGTGG TCAAGGACAA CGACGCCATC CATGTCGCCA GCGGTTATAT GCCGCAGCGC
TTCGGCCTGT ACGAAGACCT GTCGGTGATG GAGAACATGC GCCTGTATGC GCAGCTGCGC
GGCATGGACG CGGATCGCAA TGCCGATCTG TTTGCCGAGT TGCTGGACTT CACGCGGCTT
GGGCCCTTTA CCAAACGCTT GGCCGGCAAG CTCTCCGGCG GCATGAAGCA AAAGTTGGGG
CTGGCCTGTG CGCTGATGGC GCGGCCCAAG GTGCTGCTGC TGGACGAGCC CGGCGTGGGC
GTCGATCCGG TCAGCCGGCA GGATTTGTGG CGCATGGTGC AGGCACTGAC CGATGAGGGC
ATGGCCGTGG TCTGGTCCAC CGCCTACCTC GACGAGGCCG AGCGCTGCGA GAGCGTGCTG
CTGTTGAACC AGGGGCAGCT CCTGTTCGAT GGTCCACCGC AGCAACTCAC CGCGCAACTT
GAAGGCCGCA GCTTTCGCCT GGAAAACGTC GGCGCCGAGC GCCGCGCGGT TCTGACCGAG
GCACTCGATC TGGAGAGCGT GAGCGACGGA GTGATCCAGG GCGCCGGCGT GCGTGTGGTA
CTGCGGGACG GTGCGCAGGC AAGCCAAATC CAGTCGCTGG CTGATCGTGC GCGCGTAGCG
CTGGCCCCGG TGCCCGCACG CTTCGAAGAC GCTTTCATCG ATTTGCTTGG CGGCGGCCCC
GGCGGTACTT CGACACTGGC CGAGCGCCTG CCACCAGTCG AGCTGGGTTC GGACGTTGCC
GTGTCCTGCC GCAACCTCAC GAAACGCTTC GGCGAATTCA CCGCCACCGA CAACGTCAGC
TTCGAGGTGC AAAAGGGCGA AATCTTCGGT CTGCTCGGCC CCAATGGCGC CGGCAAGTCC
ACCACCTTCA AGATGCTGTG CGGCCTGTTG AAACCCACTG CTGGTGAAGC GCATGTGGTG
GGCCATGATC TGCGCCGCGC CACCGGTGCA GCCAAGGGCC GGCTCGGCTA CATGGCGCAG
AAATTCTCGC TCTACGGTCT GCTGTCGGTG CAGCAGAACC TGGAATTTTC GGCCGGCGTT
TACGGGCTGG AAGGCAACAC CCGGCGCGAG CGCATTGCCG AGATGATCGA GACCTTCGAT
CTGGGGGAGT GGCTGTCCGC CACGCCCGAT TCCCTGCCGC TGGGGCACAA GCAGCGCCTG
GCGCTGGCCT GCTCGCTCAT GCATCGGCCA CCCGTGCTGT TCCTCGATGA GCCTACTTCG
GGCGTGGACC CGATCACCCG GCGCGAGTTC TGGACCCACA TCAACGGCCT GGCGCGCAAG
GGCGTGACCA TCATGGTCAC CACCCACTTC ATGGACGAGG CCGAATACTG CGACCGCGTC
GCCATGCTCT CGCGCGCACG CCTGATCGCG TTGGACACGC CCGATGCGCT CAAGCGCGCC
GCAGCCAATG TCGAACACCC CGACCCGACC ATGGAGGACG CCTTCATTCA CCTGGTGGAA
TCTGCCGACC GCGAGATGGA GGCCGCCGCA TGA
 
Protein sequence
MQADTAMAAT PASAVAAAAV VIEGVDKHFG KVQALRSLSA HIHYGRLTGL VGPDGAGKTT 
LMRILTGLLV PNAGRVTLAG FDVVKDNDAI HVASGYMPQR FGLYEDLSVM ENMRLYAQLR
GMDADRNADL FAELLDFTRL GPFTKRLAGK LSGGMKQKLG LACALMARPK VLLLDEPGVG
VDPVSRQDLW RMVQALTDEG MAVVWSTAYL DEAERCESVL LLNQGQLLFD GPPQQLTAQL
EGRSFRLENV GAERRAVLTE ALDLESVSDG VIQGAGVRVV LRDGAQASQI QSLADRARVA
LAPVPARFED AFIDLLGGGP GGTSTLAERL PPVELGSDVA VSCRNLTKRF GEFTATDNVS
FEVQKGEIFG LLGPNGAGKS TTFKMLCGLL KPTAGEAHVV GHDLRRATGA AKGRLGYMAQ
KFSLYGLLSV QQNLEFSAGV YGLEGNTRRE RIAEMIETFD LGEWLSATPD SLPLGHKQRL
ALACSLMHRP PVLFLDEPTS GVDPITRREF WTHINGLARK GVTIMVTTHF MDEAEYCDRV
AMLSRARLIA LDTPDALKRA AANVEHPDPT MEDAFIHLVE SADREMEAAA