Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1303 |
Symbol | |
ID | 7382392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1361844 |
End bp | 1363013 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643654622 |
Product | ABC-2 type transporter |
Protein accession | YP_002552768 |
Protein GI | 222110504 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCTG TAGCACAACG CAAGGAAGGG GCTGCTTTGG AGCCGAGCGA TTTGCGCCGC TTTGACCTGC GGCGGCTGAT GGCCCTGGTC ACCAAGGAAA GCTATCAGGC GCTGCGCGAC CCCTCGACGC TCTTGATCGC CTTCGTGCTG CCGGTAGTGT TGCTGCTGCT GTTCGCCTAT GCGGTGTCGC TGGATGCCAA GGAGGTCCGC GTCGGCGTCG TGCTGGAGTC GCCCGGTGCA TCGGCGCAGT CGCTGGCCGC TGCCTTCTCG GGCACCCGCT TCTTGAAGAC GCAATTCGCC CACGACCGGC GCGAGGTGGC AGACCAGCTC GTCTCCGGTG CGCTGCGCGG CTACGTCGTC ATTCCGCAGG ATTTCGAGCA GCGCCTGGCC CAGCGCGGAG CAGAACCGCT GGTGCAAATC ATCACCGATG GCTCCTATCC CAACACCGCC AACTACGTCG AGAACTACGC CCGCGGCGTG GTGCAGACCT GGCGTGCCGG GCTGGATGTC GCGGCACCCG CGCAATCCGT CGTGCTGGAG CCACGCTACT GGTTCAACCC CGAGCTGGAA AGCCGTCGCG CGCTGATTCC CGGGGCCATT GCCATCGTCA TGACCATCAT CGGCACCATG CTGACCGCGC TGGTGGTGGC GCGCGAATGG GAGCGCGGCA CCATGGAAGC GGTGCTGTCC ACGCCCGCGT CGGTGGCCGA AATCCTGATC GGCAAGCTGC TGCCGTACTT CGTGCTCGGC ATGCTGTCCA CGCTGGGCGC GGCGGCCTTA GCCGTGTTCG TGTTCGGCGT GCCGATGCGC GGCTCTCTGG CGGCGCTGCT GCTCTTGTCG GCGGTGTTCA TGGTGCCGGC GCTGGGCCAG GGCCTCTTGA TTTCGTCGCT GGCGCGCAAC CAGTTCCTGG CGGCGCAGAT CGCCCTGTTC ACGGGCTTTC TGCCGGCCTT CATGCTCTCA GGCTTTCTGT ACGAGATCGA TGCGATGCCA GCGCCGATCC GCGCCATCAC TCGGGCGGTT CCGGCGCGCT ACTTCGTCGA TTCGCTCAAG ACCGTGTTCC TGGCCGGCGA CATCTGGGCC GTCTTCCTGC CCAACCTGGC GGCCATGGCG GCGATTGGGG CGCTGTTTTT CCTGATCGCC AAGCGCGCCA CGCGCAAGAA CCTGGAGTGA
|
Protein sequence | MNAVAQRKEG AALEPSDLRR FDLRRLMALV TKESYQALRD PSTLLIAFVL PVVLLLLFAY AVSLDAKEVR VGVVLESPGA SAQSLAAAFS GTRFLKTQFA HDRREVADQL VSGALRGYVV IPQDFEQRLA QRGAEPLVQI ITDGSYPNTA NYVENYARGV VQTWRAGLDV AAPAQSVVLE PRYWFNPELE SRRALIPGAI AIVMTIIGTM LTALVVAREW ERGTMEAVLS TPASVAEILI GKLLPYFVLG MLSTLGAAAL AVFVFGVPMR GSLAALLLLS AVFMVPALGQ GLLISSLARN QFLAAQIALF TGFLPAFMLS GFLYEIDAMP APIRAITRAV PARYFVDSLK TVFLAGDIWA VFLPNLAAMA AIGALFFLIA KRATRKNLE
|
| |