| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1124 |
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| Symbol | |
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| ID | 7384471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1178106 |
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| End bp | 1178996 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643654445 |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_002552601 |
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| Protein GI | 222110337 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0153874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCATC CCGAGTCCCC CGCCCCCCTG CGCGATCCGC GCACCGCGCC CGCCGAGGCG
CCGCCGGTCA CGCACTACGA GAACTTTCCC GTGGCTTCGC TGCTGTGCCC GCCACGGCTG
CGCCCGCCGA TCGCCGCGAT CTACGCGTTT GCGCGCACGG CCGACGACAT TGCCGACGAG
GGCACGGCCA CCGCCGCCGA GCGCCTGGCC GACCTGCGTG CCTACCGCGC CGAGCTTCAA
TCCGTGGCGG CCGGGCACTC CCCCCAGACG CGCTGGGCCG CCGTGTTTGG GCCGCTGCAG
GCGGTGTTGC GCAGCCACCA GCTGCCCGTG CCGCTGCTGG ACGACCTGCT GGACGCCTTC
ATGCAGGACG TCACCCTGAC CGAGGCCGGC GCCACCTACG CCGACCGCGC CGCGCTGCTG
GACTACTGCC GCCGCTCGGC CAACCCCGTG GGGCGCCTGC TGCTGCACCT GTACGGCGTG
CACGGGCAGG ACGCACTGCG CGAGAGCGAC GCCATCTGCA CCGCGCTGCA ACTCATCAAC
TTCTGGCAGG ACCTGAGCGT GGACCTGCCC CGCGGGCGCC ACTACCTCAC CGATGCCGAC
TGCGCCGCCC ATGGCGTGGC GCGCGCGGAC CTCGCGGCGC AGCGCCGCTC CGCCGCCAGC
GACCGGCTGG TGCTGGACTG CGCCGCCTGG GCCCGCGCTC TCATGCTCCA GGGCAGCCCC
CTGGTACACC GGCTGCCCGG CCGTGTGGGG TGGGAGCTGC GCCTGGTCGT GCAGGGCGGT
CTGCGCATTC TGGACAAGGT GCAGGCGCTG GATGGCGCCA GCCTGCTCAC GCGGCCGCGG
CTGGGCACGC TCGACTGGCC CCGCATGCTG GCGCGCGCCG CGCGCATGTA G
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| Protein sequence | MKHPESPAPL RDPRTAPAEA PPVTHYENFP VASLLCPPRL RPPIAAIYAF ARTADDIADE
GTATAAERLA DLRAYRAELQ SVAAGHSPQT RWAAVFGPLQ AVLRSHQLPV PLLDDLLDAF
MQDVTLTEAG ATYADRAALL DYCRRSANPV GRLLLHLYGV HGQDALRESD AICTALQLIN
FWQDLSVDLP RGRHYLTDAD CAAHGVARAD LAAQRRSAAS DRLVLDCAAW ARALMLQGSP
LVHRLPGRVG WELRLVVQGG LRILDKVQAL DGASLLTRPR LGTLDWPRML ARAARM
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