Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0901 |
Symbol | |
ID | 7384404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 924245 |
End bp | 925162 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643654216 |
Product | Auxin Efflux Carrier |
Protein accession | YP_002552379 |
Protein GI | 222110115 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGCG CCGTGAGTTA CGTGCAGCTT CTTCTCCCGG ATTTCTCGCT GATCCTGTTC GGCTACCTGC TGTGCCGCTA CACGCCCCTC AACCGCTCCG TCTGGCAGCC GGTGGAAAGC CTGGTGTATT ACCTGCTGTT CCCGGTGTTG CTGTTCCAGT CCATCGTCAA GAGCCCCATC AACGTGGGCG AGGCCACCGG CCTGGTGGTG GCTGGCGTGG GCACGGGCCT GTGCGGCGTG CTGCTGGCCT ACAGCCTGCC GCACCTGCCC TGGCTGGGCA GGCACATCGA CCGGCGCGAC CACGCGGCGG CGGCGCAGGT GGCTTTCCGC TTCAACTCCT TCATCGTGCT GGCCCTGGCC GAGCGCCTGG CGGGTGCGCA AGGCCTGCTC ATGGTGGCGG TGCTGATTGG CGTGTGCGTA CCGCTGCTGA ACGTGGCCGC CGTGTGGCCC ATGGCGCGCG GCGGCCAGCA GGGCTTCGTG CGCGAACTGC TGCGCAACCC GCTGATCATC GCCACGGCGA CGGGGCTGGC GGCCAACCTG CTGGGCTTTC GCATCCCGCC GTGGCTGGAG CCCACGGTGG GTCGCATCAG CGCCGCGTCG CTGGCGCTGG GGCTCATGGC TGCAGGCGCG GGCATGCAGT TCGGGTTGCT CACACGCAGC AAGCTGCTGT CTGCGTCGGT GCTGACCATT CGCCACCTGG CACAGCCGCT GATCGCCTGG GGGTTCGCGC ATCTGCTGGG GCTGGACGCC ACGCAGACCT CGGTGCTGAT GGCGTTCTGC GCCGTGTCCA CCGCATCCAC CTGCTATGTA CTCGCCGCAC GCATGGGCTA CAACGGCGCG TATGTCGCAG GCCTGGTCAC GCTGTCCACC GTGCTGGGGG TGGTGAGCCT GCCCTTCGCT CTGGGCTTGT TGCGTTGA
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Protein sequence | MLRAVSYVQL LLPDFSLILF GYLLCRYTPL NRSVWQPVES LVYYLLFPVL LFQSIVKSPI NVGEATGLVV AGVGTGLCGV LLAYSLPHLP WLGRHIDRRD HAAAAQVAFR FNSFIVLALA ERLAGAQGLL MVAVLIGVCV PLLNVAAVWP MARGGQQGFV RELLRNPLII ATATGLAANL LGFRIPPWLE PTVGRISAAS LALGLMAAGA GMQFGLLTRS KLLSASVLTI RHLAQPLIAW GFAHLLGLDA TQTSVLMAFC AVSTASTCYV LAARMGYNGA YVAGLVTLST VLGVVSLPFA LGLLR
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