| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0662 |
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| Symbol | |
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| ID | 7384167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 685258 |
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| End bp | 686451 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643653973 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002552142 |
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| Protein GI | 222109878 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.228009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGA AAATTGTGGC TGCCCTGGCG CTGTGCGGCG CGGGCGTGGC AATGGCCCAG
TCCGCCGGTA CCAGCAAGGT GGAGCTGTGG GGTATCGTGG ATGCCGCCGT GCGCCACACC
AACAACGAAG GTGCCGGCAA GGATGGCCTG ACGAAGATGA TCGGTGGCGG CATGTCGCAA
AGCCGCTGGG GCATCAATGT GGAGGAGGAC CTGGGTGGCG GGTCCAAGGC CCTGGTGGTG
CTGGAAAACC GTCTCAATGC CGATGACGGC AGTGTTTCCA CCCCCTTCTT CCAACTGTCC
TATCTGGGTC TGCAAGGCCC TTATGGCCGC CTGACTGCCG GACGTCAGTG GAATGTCCTG
TTCGACGTGG TGACCAGCAC CTACGCTTCG TTCCCGTACT CCCCCTACAT GGAAGCCTAC
AAGCCTGAGT TGGGAATGGC CATGGGCGCG CGTACCAGCA ACATGCTGAA GTACACCTTC
GCAACGCCGG ACCGCAGCTT CGTAGGCTCG CTGCAATATT CGTTTGACGA GAACAACGAC
ACCAAGGCAT TGGAAGCTGG CCTGCCTGCC TCGGCGGCGC AAGTGCCTGC CTACGTTGCA
GGCACCCTGG GTGGTGGCGC CTGGAAGACG GCTGGCGGCT ACTTGCGCTA CTCCGCGAGC
GGGTTTGCCG TCGGCGGCGG CTACATGCGC ACGACGCTGC CAGGCGGCAC CGACGTAGAC
GCCTGGACTC TGGGCGGTTC GTACCGCACG GGTCCGTGGT ACTTCAATAC AGGCTATGGC
CTGAACAAGG CGAAATACGC TACGGTGACC AACCCGATCC AGGGTTTCCG TAATCTCGTC
GACGGAGCGA TCCTGGGGCA ATTCTGGGCC GGCCAGACCA ATGGCGGCTT CCAGCCGGGC
GACGCCAACA AGCGCCAGCT GTTCAAGGTA GGTGTGGGCT ATCAGTTGAC GCCTCAGCTC
AACCTGGGCG CGCACTACTT CCGCGGTAAG CAGTCGGGCT CGGCCACGGG TGCTTCCAAC
GGCAACGTCA ACTTCTACGT GGCCGTGGCG GACTATGCCT TCAGCAAGCG CACCGATGCC
TACTTCGGCG TGGACCACAC CAGCATCAGC GGCGGCAGCG CGCTCGTGCT GGATGCGGCG
AGCGGCGCAC GCAGCCGTAC CGGCATCACC GTGGGTGTCC GCCATCGCTT CTAA
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| Protein sequence | MQKKIVAALA LCGAGVAMAQ SAGTSKVELW GIVDAAVRHT NNEGAGKDGL TKMIGGGMSQ
SRWGINVEED LGGGSKALVV LENRLNADDG SVSTPFFQLS YLGLQGPYGR LTAGRQWNVL
FDVVTSTYAS FPYSPYMEAY KPELGMAMGA RTSNMLKYTF ATPDRSFVGS LQYSFDENND
TKALEAGLPA SAAQVPAYVA GTLGGGAWKT AGGYLRYSAS GFAVGGGYMR TTLPGGTDVD
AWTLGGSYRT GPWYFNTGYG LNKAKYATVT NPIQGFRNLV DGAILGQFWA GQTNGGFQPG
DANKRQLFKV GVGYQLTPQL NLGAHYFRGK QSGSATGASN GNVNFYVAVA DYAFSKRTDA
YFGVDHTSIS GGSALVLDAA SGARSRTGIT VGVRHRF
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