| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0465 |
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| Symbol | |
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| ID | 7384052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 479561 |
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| End bp | 480307 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643653779 |
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| Product | RNA-binding S4 domain protein |
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| Protein accession | YP_002551948 |
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| Protein GI | 222109684 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.117084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGA ACAAGCGCAT GGCCGATCTG AGGCTGTGCT CGCGCCGCGA GGCCGACGAC
TGGATCGCCC AGGGCTGGGT GCGCGTCAAC GGGCAGGTGG CGGCCATGGG GCTGCAGGTG
GGGCCGCACG ACCGCATCGA CGTGGACCGC GCGGCCCAGG GCCACCAGCG CCAGCAGGTG
ACCATCCTGC TGCACAAGCC CATGGGCTAT GTGAGCGGTC AGGCCGAGGA CGGCCACACG
CCGGCCGTGG CGCTGATCAA CCCACGTACG CACTGGAAGG ACGATGAGAG CCGCACGCGC
TTCGCGCCGG CGCAACTCAA GGGCTTGGCA CCCTGCGGGC GGCTGGACAT CGACTCCGTG
GGCCTGCTGG TGCTGACGCA GGACGGCCGC GTGGCGCGCC AGCTCATCGG CGAGGACTCG
ACGGTGGACA AGGAATACCT GGTGCGCGTG CAGTACGGCG ATCGCGCGCA GGATGTGCGC
GCCGTCTTCC CCGCCGACAA GCTGGCGCTG CTGAACCATG GCCTGGCGCT GGACGGCCAG
CAGCTCAAGC CGGCGCTGGT GGAGTGGCAG AACCCCGAGC AGTTGCGCTT CGTGCTGCGC
GAGGGCAAAA AGCGCCAGAT CCGCCGCATG TGCGAGCTGG TGGGCCTCAA GGTGGTGGGC
CTCAAGCGCA TCCGCATCGG CCAGGTGCTG CTGGGCAAGC TGCCGCCGGG CCAGTGGCGC
TATCTGGCGC CGGGTGAGCG CTTTTAA
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| Protein sequence | MRLNKRMADL RLCSRREADD WIAQGWVRVN GQVAAMGLQV GPHDRIDVDR AAQGHQRQQV
TILLHKPMGY VSGQAEDGHT PAVALINPRT HWKDDESRTR FAPAQLKGLA PCGRLDIDSV
GLLVLTQDGR VARQLIGEDS TVDKEYLVRV QYGDRAQDVR AVFPADKLAL LNHGLALDGQ
QLKPALVEWQ NPEQLRFVLR EGKKRQIRRM CELVGLKVVG LKRIRIGQVL LGKLPPGQWR
YLAPGERF
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