Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0254 |
Symbol | |
ID | 7383838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 271639 |
End bp | 272385 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643653567 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002551738 |
Protein GI | 222109474 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.818245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAAGA TTGTTCTGAT CACTGGCGGC AGCCGGGGCA TCGGCGCTGC CGCCGCCTTA TTGGCCGCGC AGCGCGGCTG GGCCGTGGCC ATCAACTACC TGCGCCACGC CGAGGCCGCG AACGGCGTGG TGCGCCAGAT CGAGGCCGCG GGCGGGCGCG CCATCGCCGT GCAGGCCGAT GTGGCGGTGG AGGCCGACGT GGTGACTCTG TTCGAGACCG TGGACCACCG CCTGGGGCGC CTCACGGCAC TGGTGAACAA CGCGGGCGTG GTGGACCGCC CTGCCCGCGT GGACGAAATG CACGGCGAGC GCCTGCGGCG CATGTTCAGC ATCAACGTGC TGGGCGCCTT CTACTGCGTG CGCGAGGCGG TGCTGCGCAT GAGCACGCGC CATGGCGGCG CCGGCGGCAG CATCGTCAAC GTGTCCAGCA TCGCGGCCCG GCTGGGTGCA CCCCATCAGT ACGTGGACTA TGCGGCGTCC AAGGGCGCGC TGGACACGCT CACCATAGGC CTGGCGCACG AGGTGGGCGG CGAGGGCATC CGCGTGAATG CCGTGCGCCC CGGCCTGATC GACACCGATA TCCACGCCAG CGGCGGCCTG CCCCACCGCG TGCGCGACCT GGCAGGCCAG GTGCCCATGG GGCGCGGCGG CACGCCCGAG GAAGTGGCCG AAGCCATCGT GTGGCTGATG TCGGACGCGG CCAGCTACAC CTCGGCCACG CTCATGGACA TTGCCGGGGG CCGCTGA
|
Protein sequence | MDKIVLITGG SRGIGAAAAL LAAQRGWAVA INYLRHAEAA NGVVRQIEAA GGRAIAVQAD VAVEADVVTL FETVDHRLGR LTALVNNAGV VDRPARVDEM HGERLRRMFS INVLGAFYCV REAVLRMSTR HGGAGGSIVN VSSIAARLGA PHQYVDYAAS KGALDTLTIG LAHEVGGEGI RVNAVRPGLI DTDIHASGGL PHRVRDLAGQ VPMGRGGTPE EVAEAIVWLM SDAASYTSAT LMDIAGGR
|
| |