| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9632 |
|---|
| Symbol | |
|---|
| ID | 7381855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011991 |
|---|
| Strand | - |
|---|
| Start bp | 92048 |
|---|
| End bp | 92989 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643653298 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002551469 |
|---|
| Protein GI | 222109204 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGGACACCC ACGAACTAAC ACATAAGGAG TTTCCGCTTC CGAACTTCGG ACTGAGGCTT
CACAGCCTCA CGAAGGAACT GGAAAACGGG CTTGGCTTTC GTCTCATTAA AGGCCTCCCA
ATCAACGACA AAGATGAAGC TGGCGCTAGG CTCATCTCGT GGGGTCTCGG CCTTTATATA
GGAGTAGCCT TACCGCAAAA TTCTGATGGC GCGCTGATCC ATGACGTACG TGATCGCGGA
GAAACCAGTG CGGCGACATT GCGCGGCAAT GGCACCTCTG AAGAAATCCA ATTTCACATT
GATCCGTGTG ACGTGGTTGC TCTTTTCTGC AGGCGATCTG CCGCCGTGGG CGGACAGAGC
AGGTTGTGTA GCTCGATCGA AATTCACAAT CGATTGGCAA TGGAGGACCC AGATTTGTTG
GAGGTGCTCT ATTCAATGCT TCCGTTCGCT TCTTTAGGCA GTGCCCCCCC AGACGCGCAT
GTCTATAACA CTCCGGTTTT TGGATGGAAG AATGGGCTTT TTACGAGCCA CTTTTATCGC
GCTCGCATCA TCCATGCCGG ATCACTCCCG TCGGTGAATC TCTCTCCCGA ACAGAGACGA
GCAGTCGATC GCGTCAGTGA GATTGCGTCC AATCCGGATA TGTACCTCGA GATGAACCTT
GAGCCAGGGG ACCTACAGCT GGTAAACAAC CACATCCTCT ACCACGCCCG GTCGTCATAT
GAGGACTACC CCGACCCTGA CCTGCGCCGA CACCTTTTTC GCCTTTGGTT CTCTGTACCC
GACAGTCGCG AACTCCCCGA TGAGTTCGCA GGTTTTTGGG GAACGACCGA GGCGGGAAGC
GTCCGGGGAG GCGTCAGATC TTGGCAGGAT AAATATCAAC ATGTGAGTCG ATACCAGAAG
GCGATTGCCG AATACCATGG TATGGCAGTA GCAAAAAGCT AA
|
|---|
| Protein sequence | MDTHELTHKE FPLPNFGLRL HSLTKELENG LGFRLIKGLP INDKDEAGAR LISWGLGLYI
GVALPQNSDG ALIHDVRDRG ETSAATLRGN GTSEEIQFHI DPCDVVALFC RRSAAVGGQS
RLCSSIEIHN RLAMEDPDLL EVLYSMLPFA SLGSAPPDAH VYNTPVFGWK NGLFTSHFYR
ARIIHAGSLP SVNLSPEQRR AVDRVSEIAS NPDMYLEMNL EPGDLQLVNN HILYHARSSY
EDYPDPDLRR HLFRLWFSVP DSRELPDEFA GFWGTTEAGS VRGGVRSWQD KYQHVSRYQK
AIAEYHGMAV AKS
|
|---|
| |