Gene Avi_9616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9616 
SymbolistB 
ID7381954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011991 
Strand- 
Start bp82904 
End bp83491 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content60% 
IMG OID643653289 
ProductIS21 family transposase 
Protein accessionYP_002551460 
Protein GI222109195 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0788142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGGCGCAGC TTGGCTTCGT CGATCGACAC GAGGCCGTGC ATTTCCTCGG CCCACCTGGA 
ACCGGCAAGA GTCATCTTGC CACGGCGCTC GGCGTCGAAG CCGTCAAAGC TGGAAAGAGC 
GTCTACTTCA CGAACCTTGC CGACCTCATC GGTTCGCTGG CCCGTTCCGA ACGGGAGGGT 
CGGCTTCAGG AGCGCATTCG CTTCTTTTGC AGGCCAAGCC TGCTCATCGT TGACGAGATC 
GGATATTTGC CGGTCGTCCA GGGTGGCGGC AATCTGTTCT TCCAACTCGT GAACGCCCGA 
TATGAACGAG GTGCGATGAT CTTGACATCA AACCGCGGCT TCGCTGAATG GGGCGATGTC 
TTCGGGGACC CGGTTGTCGC CACCGCGCTT CTCGACAGAC TGCTGCATCA CGCCGTCGTC 
GTGCAAATCG AGGGATCGAG TTACCGATTG CGCCAGCATG CCGAACTGAT GCCGGAGCAT 
GTTCGCTCCA AAGCCCTCAT TGCTCCGCCC GCATTCGCTC CACCTCAAAA GCCACGCGGG 
CGCGCGCCGA AAAATCCCCA ATCCTCCCTG GCATCCACGT CGGCATAA
 
Protein sequence
MAQLGFVDRH EAVHFLGPPG TGKSHLATAL GVEAVKAGKS VYFTNLADLI GSLARSEREG 
RLQERIRFFC RPSLLIVDEI GYLPVVQGGG NLFFQLVNAR YERGAMILTS NRGFAEWGDV 
FGDPVVATAL LDRLLHHAVV VQIEGSSYRL RQHAELMPEH VRSKALIAPP AFAPPQKPRG 
RAPKNPQSSL ASTSA