Gene Avi_9580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9580 
Symbol 
ID7381931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011991 
Strand
Start bp59884 
End bp60285 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content61% 
IMG OID643653266 
Producthypothetical protein 
Protein accessionYP_002551437 
Protein GI222109172 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0133051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATGG CAACCATCGG CACCTTCACC ACCACTGAAA ACGGCTTCAC AGGCTCGATC 
CGCACGCTTG CTCTCAACGT CAAGGCACGC ATCGCCCGCG TCGAAAACCC CTCCGACAAA
GGCCTCACTT CCGCATCTAC GCGGGCAATG TCGAGCTGGG TGCAGCCTGG CAGAAGCGCT
CCGAGCAAAC TGACCGCGAC TATCTTTCGG TCAAGCTCGA CGATCCGAGC TTCCCGGCTC
CGATATACGC AACGCTCTCC GAGGTCGAGA CGAGGACGGC TACCAGCTGA TCTGGTCCCG
CCCGAACCGG GACTGAACAA AGATCGCCAA CGGCCCCGCC CGACAGGCGG GGCCTCTGTC
CCGATCGGCA ACCGCATCGA TCACAGCGTT GCCATTTTAT AG
 
Protein sequence
MTMATIGTFT TTENGFTGSI RTLALNVKAR IARVENPSDK GLTSASTRAM SSWVQPGRSA 
PSKLTATIFR SSSTIRASRL RYTQRSPRSR RGRLPADLVP PEPGLNKDRQ RPRPTGGASV
PIGNRIDHSV AIL