Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9580 |
Symbol | |
ID | 7381931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011991 |
Strand | + |
Start bp | 59884 |
End bp | 60285 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643653266 |
Product | hypothetical protein |
Protein accession | YP_002551437 |
Protein GI | 222109172 |
COG category | [S] Function unknown |
COG ID | [COG5489] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0133051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATGG CAACCATCGG CACCTTCACC ACCACTGAAA ACGGCTTCAC AGGCTCGATC CGCACGCTTG CTCTCAACGT CAAGGCACGC ATCGCCCGCG TCGAAAACCC CTCCGACAAA GGCCTCACTT CCGCATCTAC GCGGGCAATG TCGAGCTGGG TGCAGCCTGG CAGAAGCGCT CCGAGCAAAC TGACCGCGAC TATCTTTCGG TCAAGCTCGA CGATCCGAGC TTCCCGGCTC CGATATACGC AACGCTCTCC GAGGTCGAGA CGAGGACGGC TACCAGCTGA TCTGGTCCCG CCCGAACCGG GACTGAACAA AGATCGCCAA CGGCCCCGCC CGACAGGCGG GGCCTCTGTC CCGATCGGCA ACCGCATCGA TCACAGCGTT GCCATTTTAT AG
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Protein sequence | MTMATIGTFT TTENGFTGSI RTLALNVKAR IARVENPSDK GLTSASTRAM SSWVQPGRSA PSKLTATIFR SSSTIRASRL RYTQRSPRSR RGRLPADLVP PEPGLNKDRQ RPRPTGGASV PIGNRIDHSV AIL
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