| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9553 |
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| Symbol | parB |
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| ID | 7381916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | + |
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| Start bp | 47213 |
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| End bp | 49003 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643653252 |
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| Product | plasmid partitioning protein |
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| Protein accession | YP_002551423 |
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| Protein GI | 222109158 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATCG TCAGACTCGA TCCGCGCGCA TTGAAGGACA ATCCGGACAG GACACGCCGG
TCGCAATCAT CGCCGCAATC CGACGCCCTG ATGCTGGCGA CCATCAAGGC CGTCGGCATC
ATCCAGCCGC CTGTGGTCGC GCAGGAACGT GATGGCGGCA ACGCCTACGT GATTGACGCC
GGTCACCGCC GCGTCAAACA GGCGATCGCC GCCGGCCTTG AGGAAATCGA GGTTTTGGTC
GCGGACGCCA GCGACGACAA CGGCGCCATG CGCGGCATGA TCGAGAACAT CGCCCGCGAG
CCCCTTAACC CGGTCGATCA ATGGCGCGGC ATCGAGCGTC TCGTCGCGCT TGGATGGACC
GAGGAGGCGA TTGCCGTCGC ACTCGCCCTG CCGGTACGGC AGATCAGGAA GTTGCGACTT
CTCGCCAACG TGCTGCCAGC CATGCTCGAA CAGATGGCCA AGGGGGACAT GCCGTCGGAG
CAGCAGCTTC GCACGATTGC GGCAGCCTCG CTCGAAGATC AGAAGGAAGT CTGGAAGGCG
CAGAAGCCGA AGAAGGGGGA CACCGCATCC TGGTGGGCGA TCGCCAACGG GCTCAGCAAG
ACGCGCATGT ATGCCAGGGA TGCAAGCTTT GGTGAGGACC TGGCACAGGC CTACGGTATC
GCGTGGGTCG AGGACCTGTT CGCACCGGCC GACGAGGACA GCCGCTATAC GACGGATGTC
GAAGCGTTCC TCGGCGCGCA GCAGGAGTGG ATGACCAGCA ACCTCCCTAA AAAGGGTGCC
ATCGTCGAGG TCAACAGCTG GGGCCAGCCG CAGCTTCCGG CAAAGGCCGA CCGTGTCTAT
GGCAAGCCAG GCAAAGGTGA TTACACGGCG ATGTACATCG ATCGCGATGG CAAGGTCCAG
TCGGTCCACT ACCGGATGCC GGAAAGCAAA AAGACCAAGG CGAAGGGCGA TACCGGTTCG
CCAGACGGGG ATCTCGATGA TGATGCCATC GCTGTCACCG CCAAGCCCCG TCCCGATGTG
ACGCAGAAGG GCCAGGACAT GATCGGTGAT TTCCGCACCG ACGCCCTTCA TGAGGCGCTC
GGTCGCGCGC CGATCGAGGA CGATATGCTG ATGGCGTTGC TCGTAATCGC CTTCGCCGGC
CTGAATGTTC GGGTCGATAC AGGTGCCGGT GGCGATGTCT ACGGCACGAA ACGGTTCAAC
GGCCACGTCG GCCCCCTGCT GGATGAAAAC GGCAAGATCG ACCTTGACAC GGATAGACTG
CGGGTCGCGG CACGTTCCGT GCTGATCGAC GTCCTGTCGT GCCGACGCAA CAGTTCGAAC
AGCGGCATTG TCGCGCGTAT CGCCGGAGAC GCCATCGGTG CGGACGCATT CCTGCCCAAC
ATGGGCACCG AAGACTTCCT GTCATGCCTA TCGCGCCATG CGCTCGAAAC CTCCGCTGGG
CAAGCTGCCG TTGTACCTCG CCCCAAGGTC AAGGAAACCC GCGCGGCACT TGTAGACCAT
TTCAAGGAGG AGAGGTTCGT CCATCCTACT GCCCTGTTTG CACCGGCCAT GGAAGACCTC
ACCGCCTTGT TCAAGGCGGG CGCTGCTCCT GATGAGGATG CCGATACCTC TTTCGGCACG
GCTGAAGATG ACATTGTCGA ACACACCGCC CGCGATGCGG GGCGGGATGA GGACGATGTC
GTGGACCAGG CCGACTCTAC GTCATCTGAA GCGGCCGCAA ACGAGCCTGC CACTGATCCC
CTGGTGGATG AGCCGTCGGT CGATGACCAT TACGGCATTG CGGCCGAATA G
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| Protein sequence | MHIVRLDPRA LKDNPDRTRR SQSSPQSDAL MLATIKAVGI IQPPVVAQER DGGNAYVIDA
GHRRVKQAIA AGLEEIEVLV ADASDDNGAM RGMIENIARE PLNPVDQWRG IERLVALGWT
EEAIAVALAL PVRQIRKLRL LANVLPAMLE QMAKGDMPSE QQLRTIAAAS LEDQKEVWKA
QKPKKGDTAS WWAIANGLSK TRMYARDASF GEDLAQAYGI AWVEDLFAPA DEDSRYTTDV
EAFLGAQQEW MTSNLPKKGA IVEVNSWGQP QLPAKADRVY GKPGKGDYTA MYIDRDGKVQ
SVHYRMPESK KTKAKGDTGS PDGDLDDDAI AVTAKPRPDV TQKGQDMIGD FRTDALHEAL
GRAPIEDDML MALLVIAFAG LNVRVDTGAG GDVYGTKRFN GHVGPLLDEN GKIDLDTDRL
RVAARSVLID VLSCRRNSSN SGIVARIAGD AIGADAFLPN MGTEDFLSCL SRHALETSAG
QAAVVPRPKV KETRAALVDH FKEERFVHPT ALFAPAMEDL TALFKAGAAP DEDADTSFGT
AEDDIVEHTA RDAGRDEDDV VDQADSTSSE AAANEPATDP LVDEPSVDDH YGIAAE
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