Gene Avi_9549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9549 
Symbol 
ID7381913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011991 
Strand- 
Start bp46023 
End bp46520 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content58% 
IMG OID643653249 
Producthypothetical protein 
Protein accessionYP_002551420 
Protein GI222109155 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.207338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTATC TTGGTCCGCT TTATCGCGCG CTCAACCCCG TATACGCGCG TGAACCACTA 
TCCGGTCGTG GTGCCGAACT CTATGGCGGC CGGTTCAACC CAAAAGGAGT TCCGGCACTT 
TACACATCCC TGTCGATAAT CACGGCATTG CGAGAAGCCA ACCAGGCCGG CAGTTTTCAA 
CCGACGACAC TGGTGTCCTA TGACGCGGAA ATCAACCACG TGTTTGATAC GAGAGATGAG 
ACCACGCTTG CCAGGAAAGG CATGGATAGG GCAGCGCTCA GCGACGACAG CTGGCGCGAC 
CAGATGAAGG CGACCGGTGA AGCGCGAACG CAGGCCTTCG CCCGCCTGTT GATAGCCGAG 
GGCTATAGTG GGCTGCTGGT GCGGAGCTTC GCCCAGGGCG TCGGAGAAAA AGATCTCAAT 
CTCGTACTGT GGAAGTGGGG TGAGAAGACC CCCTCCCGCC TGACATTGGT CGATGACGAA 
AACAGGCTAT CTCGATAG
 
Protein sequence
MEYLGPLYRA LNPVYAREPL SGRGAELYGG RFNPKGVPAL YTSLSIITAL REANQAGSFQ 
PTTLVSYDAE INHVFDTRDE TTLARKGMDR AALSDDSWRD QMKATGEART QAFARLLIAE 
GYSGLLVRSF AQGVGEKDLN LVLWKWGEKT PSRLTLVDDE NRLSR