| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9546 |
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| Symbol | |
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| ID | 7381912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | + |
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| Start bp | 45642 |
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| End bp | 45941 |
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| Gene Length | 300 bp |
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| Protein Length | 99 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643653248 |
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| Product | CspA-like protein |
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| Protein accession | YP_002551419 |
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| Protein GI | 222109154 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.513186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACGG GGAAACTCAA ATGGTTCGAT ACCACCAAAG GCTACGGTTT CATCACGTCT
GACGACGGTG GTCCCGATGT CTTTCTCCAT CTTAGTAAGG TGACGGAGGC CAATCTTCCA
ACGTTGCAGC CCGGTGTGCG GCTCCGCTAC GTGCTGGGCC GTCAGGGCAA TAAGGTTTCG
GCGCACGACT TGTCTTTGAT GCCAGATGAA GCCGCCACTC GGTCCCCCGC ACGCATGATC
GACGGCGATG CTGATTTCGA GGCAGAGTTC GAAAGAGAAT GGGGACTTCG ACGGGGTTAG
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| Protein sequence | MPTGKLKWFD TTKGYGFITS DDGGPDVFLH LSKVTEANLP TLQPGVRLRY VLGRQGNKVS
AHDLSLMPDE AATRSPARMI DGDADFEAEF EREWGLRRG
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