Gene Avi_9538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9538 
Symbol 
ID7381907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011991 
Strand+ 
Start bp37940 
End bp38665 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content59% 
IMG OID643653243 
Producthypothetical protein 
Protein accessionYP_002551414 
Protein GI222109149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.145256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCCTGC CGGACGCGAT GGCGGCCTTA CGGAAGGGGT CATGGAGGAC TGAAGAGAGA 
CGATACGGTC GAGAGGACGG TGTTGCGCTT CGGTCTGGAC AAGCGCGCAA GGAGCCGCAA 
ATGCTCACCT CTTCCGAACC TCGAAAAATC TTCCAGGGTG TCGCCACCCG CAGCCAAATG 
TTCAGCCTGT TCGATCGCCA CCGCCAAATG TCTAGCCGCT TCGACGGTGA TGTGAGTGCG 
CTTTATGCCG GCGAATGGTT TGCAATCGGC GAAGCCGAGC ATGACTACAT GTTCGACATC 
CTGCCGCCTC TGTGGATCCG CGGTGACACA TTCGCGATGC GCGAGTTCAT GACCGGCTCA 
GTGACGTCGG TGTTTTTCAC GTTGCAGATC GACGGAGCGA TCAGGCACTT CCACAGCTAC 
TGCGATCTCG CCGACACGCA ATCCGTCGGG CGAATGCGGC AAGCTATCAA CCAGTGCGAG 
ACTCGACCGC TCCAGACAAT GACGCGTGAC GAACAGCTCG AGCACATCTG GAGCATGACG 
TCGGACGCCT ATCGCGGCTA TTCGAACGAC GACCATCCGC AGCATCTACC TGGGCGCCGG 
ATGATTATTG TCTTTTCCGA TGGCGGCACC GGTCGGCAAA AGCTGCTTGC GGATCTGACC 
GACACGGAAA TCGCGGCGAA GCTACCGGTT CATCTGCGCT ACCTGCCAGA CGCAATCGCC 
GCGTGA
 
Protein sequence
MTLPDAMAAL RKGSWRTEER RYGREDGVAL RSGQARKEPQ MLTSSEPRKI FQGVATRSQM 
FSLFDRHRQM SSRFDGDVSA LYAGEWFAIG EAEHDYMFDI LPPLWIRGDT FAMREFMTGS 
VTSVFFTLQI DGAIRHFHSY CDLADTQSVG RMRQAINQCE TRPLQTMTRD EQLEHIWSMT 
SDAYRGYSND DHPQHLPGRR MIIVFSDGGT GRQKLLADLT DTEIAAKLPV HLRYLPDAIA 
A