Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9507 |
Symbol | |
ID | 7381882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011991 |
Strand | + |
Start bp | 6241 |
End bp | 6768 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643653218 |
Product | hypothetical protein |
Protein accession | YP_002551389 |
Protein GI | 222109124 |
COG category | [S] Function unknown |
COG ID | [COG5654] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.127504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTCA CGCGTCTTGG CCCGCCCGGC GAGGTCTTTC ACCGTTTTCT CACGCCAAGA TGGTCTCACC TTCCAACCAG CGGCGCCGGG GCTGCGGCCG ATGGCGGACG TTTCAACCGT CCAGGAATAG AAGCTCTCTA TCTTTCCAGA GCTCCACAAA CAGCCCTTGA GGAGTACCGT CAGGGCGCCT CAATCACACC GCCGGCGACA CTTGCAGCAT ACAGTGTCGT GCTTGATCGG GTCGCCGATC TGTCCGGCGG ATTCGATCCG CTCCTGTGGG ACGCCACATG GGCCGAATGG GATTGTCCCT GGCGCAGGAT TGTCCGGATC GACCGAAAAA TTCCTGCATC GTGGAAACTC TCCGATATCG TGATCTCTGC CGGATACAAG GGAATTCTCT TTCCATCGCT TCGGCATGCG GGCGGTACAA ATCTCGTCGT GTTTAGCGCC AATCTGATCG ATGACGACAC GGTCGAGGTC CATGATCCCG ATGGACGCTT GCCCAAGGAC CAGTCCTCCT GGCCTTGA
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Protein sequence | MKLTRLGPPG EVFHRFLTPR WSHLPTSGAG AAADGGRFNR PGIEALYLSR APQTALEEYR QGASITPPAT LAAYSVVLDR VADLSGGFDP LLWDATWAEW DCPWRRIVRI DRKIPASWKL SDIVISAGYK GILFPSLRHA GGTNLVVFSA NLIDDDTVEV HDPDGRLPKD QSSWP
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