| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4364 |
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| Symbol | |
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| ID | 7387940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3679771 |
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| End bp | 3680721 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643653010 |
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| Product | hypothetical protein |
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| Protein accession | YP_002551181 |
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| Protein GI | 222150224 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.554925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGAAGACGG GATTTCGGCA ACGGCTGGAC GCAATCGCGC TCAGCCGTTT TGCCTTGCCC
GACTTGAATG CAGATAAGCC GGATGCAGCC GAAAGGCGGC TGCCCCCCTT CCCTTTTCCA
GACGAGGTAT CGATGCGAAC CAGGACGTTT TTTGCCATAG CTTTCACGGC TCTCGCCACA
CTGGCGACAG CACAGGCTGC AAATGCCGCC CAATGCGGCA ATACGTCCGC CGGTTTCGAG
CAATGGGTGG AAGGCTTCAA GCGGGAAGCC GTGGGCCGTG GCATCAGCCA ATCGGTTCTC
GACCGCTCTT TTGCCAATGT TCGTTACAAT GTCCCGACCA TCCGGGCCGA TCGCGGCCAG
AAGAGCTTCA AGCTCTCCTT CGATGAATTC ATGAAAAAGC GCGGTGGGCA AACCATCATC
AGCCGCGGCA AGTCGATGAA AAGAGCAAAT GCCCCGCTTT TCGCCAGCAT CGAGCGGCGT
TTCGGCGTAC CGGCTGGCCC TATCATCGCC ATCTGGGGCA TGGAAACCGG GTTTGGCAGC
TACATGGGCA ATGAACACAC GCTGTCCGCT GTCTCGACCC TCACCTACGA TTGTCGCCGC
AGCGATTATT TCCGTGAGCA GCTTTACGCC GCCTTGAAAC TGGTGGCCGA TGGCGATCTG
GACGTAAACT CCCGTGGTGC CGCCCATGGC GAAATCGGCC AGACGCAGTT CCTGCCGAAA
AATGTCACGC TCTATGGCGT CGATGGCGAC GGTGACCGCC ATATCGACCT CATCCATTCC
CGCGCCGACG CCCTGTCGTC CACGGCCAAT TTCCTGAAGG GTCATGGCTG GCAGCCCGGC
CTTGGTTATC AGCCGGGCGA GCCGAATTTC TCCGCCATCG GCGGCTGGAA TGCGGCCACG
GTCTACCAGC AGGCGATTGC CTATATCGGC AAGCAGATCG ACGCTCCCTG A
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| Protein sequence | MKTGFRQRLD AIALSRFALP DLNADKPDAA ERRLPPFPFP DEVSMRTRTF FAIAFTALAT
LATAQAANAA QCGNTSAGFE QWVEGFKREA VGRGISQSVL DRSFANVRYN VPTIRADRGQ
KSFKLSFDEF MKKRGGQTII SRGKSMKRAN APLFASIERR FGVPAGPIIA IWGMETGFGS
YMGNEHTLSA VSTLTYDCRR SDYFREQLYA ALKLVADGDL DVNSRGAAHG EIGQTQFLPK
NVTLYGVDGD GDRHIDLIHS RADALSSTAN FLKGHGWQPG LGYQPGEPNF SAIGGWNAAT
VYQQAIAYIG KQIDAP
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