| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4337 |
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| Symbol | ispA |
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| ID | 7386573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3656851 |
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| End bp | 3657702 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652989 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_002551160 |
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| Protein GI | 222150203 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.715875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCTGACCG AGCTTTTGCA ACCTGAGCCT CTATCGGATG AAATCGCCAG GCCGGGTCAA
TTGCTGGCGG CAATGCGCCA TGCCGTGCTG AACGGCGGCA AGCGGCTACG GCCATTTCTG
GTGGTGGAAA GCGCTCGGCT ATTTCATGGC CAGGACGATG CCGCCTTGCG GGTTGGAGCG
GCGCTGGAAT GCCTGCATTG CTACTCTCTC GTGCATGATG ATCTGCCCGC CATGGATGAC
GACGATCTGC GTCGTGGCCA GCCAACTGTG CATATCGCCT TTGACGAGGC GACGGCCATT
CTGGCCGGTG ACAGCCTGCT GACTTTTGCC TTTGAGATCA TTGCCTCACC ACAAACCACA
TTGCCGGACG CTGCCAAGAC CGCGCTGGTT CTGGCGTTGG CGCGGGCTGC CGGGCTTGGC
GGCATGGCGG GCGGGCAGGC GCTGGATCTG GCCGCGGAGA AACACGCTCC GGACGAGGTC
GGCATCGTCA CATTGCAGGC GATGAAAACC GGCGCACTGT TGCGCTTCGC CTGCGAGGCT
GGACCAGTGA TTGCCGGGGC ATCGAACGAG GACCGGGAGC GGCTTCGCCA GTTCGGCGAG
TTGATCGGTC GGGCTTTCCA GCTTGCCGAC GATCTCCTCG ATTTGACGGC TGATGCTGCG
ACCATGGGCA AGGCGACGGG CAAGGATGCC GGGCGCGGCA AGGGGACACT CGTCGCCCTC
AAGGGCCAGG CCTGGGCGGA AGCCGAGCTG GATCGGCTGG TCGATCAGGC GGTCGCGTTG
CTGTCTCCCT ATGGCGAACG CGCCGCAGTG TTGATGGCTG CCGCCCGTTT TGTCGCCAAT
CGCAAGAATT GA
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| Protein sequence | MLTELLQPEP LSDEIARPGQ LLAAMRHAVL NGGKRLRPFL VVESARLFHG QDDAALRVGA
ALECLHCYSL VHDDLPAMDD DDLRRGQPTV HIAFDEATAI LAGDSLLTFA FEIIASPQTT
LPDAAKTALV LALARAAGLG GMAGGQALDL AAEKHAPDEV GIVTLQAMKT GALLRFACEA
GPVIAGASNE DRERLRQFGE LIGRAFQLAD DLLDLTADAA TMGKATGKDA GRGKGTLVAL
KGQAWAEAEL DRLVDQAVAL LSPYGERAAV LMAAARFVAN RKN
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