Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4311 |
Symbol | cheW |
ID | 7386552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3624532 |
End bp | 3625026 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652968 |
Product | chemotaxis protein |
Protein accession | YP_002551139 |
Protein GI | 222150182 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGGAC AATCGTCAGA ATCGCAATTT GTCACCTTCA GCCTTGGTGA AGAAGTGTTT GCCGTGCCCG TTACCGTGGT CCGGGAAATT CTCGATCACG AGGATCCGTT CAAGATCCCG CATGGACCGG ATTATCTTCT GGGCCTGCGG GATGTCCGGG GCCAGGGCGT GCCGGTCATT GATCTTCGTC TGCGGCTCGG CATGTCGCGC ACGGTGAAGA CGCCGCACAC CCGGATTCTG GTGATGGATG TGCCACTTTC CGATCGCAGT CTTGCGGTCG GGGTGGTGGC CGACAAGGTC TTCGAGGTCA TTCCCTTCCG GCATGCCGAC ATCGAGCAGG CGCCCGATAT CGGCATCCGC TGGCGCTCAG ATTATATCCA GGGCGTGGTG CGCCGTGAGG CGGGCTTTGT GGTGATCATT GATCTGGCGC GGTTGTTTTC GGGCGATGAA ACTGCCCTTG CCTCTTCTTC TGCACCGGCT TTTGCCGTCG CGTGA
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Protein sequence | MSGQSSESQF VTFSLGEEVF AVPVTVVREI LDHEDPFKIP HGPDYLLGLR DVRGQGVPVI DLRLRLGMSR TVKTPHTRIL VMDVPLSDRS LAVGVVADKV FEVIPFRHAD IEQAPDIGIR WRSDYIQGVV RREAGFVVII DLARLFSGDE TALASSSAPA FAVA
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