Gene Avi_4305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4305 
Symbol 
ID7386547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp3619906 
End bp3620478 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content59% 
IMG OID643652963 
Producthypothetical protein 
Protein accessionYP_002551134 
Protein GI222150177 
COG category[S] Function unknown 
COG ID[COG4709] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGG ATGCCTTCTT ACGCATGCTG AGACTGGGGC TGGCCGGTTT GCCTGCTCAA 
GAAGTGGACG ACATCGTCGC CGATTATCAG GCTCACTTTG CCGAATCAGC CGCCTCCGGT 
CGCAGTGAAC AGGAGGTTGC GGCGGCCTTG GGCAATCCGG CCAGAATTGC CAGAGAGCTC 
AGGGCCGAAA TGGGGCTGCG CCGTTTCGAA TCCCATTGGA GCCTGTCGAA CATGCTGGCG 
GCCATGATGG CGCTGGCGGG GCTCGCCATC GTTGACATCC TGTTTTTACT GCCCCTGCTC 
ACTGTGGCGT TCTTTACCGT GTTCGGCCTT GGAATTGCGG TCACGGCCAT CGGAGCGGCT 
GGCGTGAAGA TCATCATTAC CACGATGCTG TTTCAGTTTG ATGGACCAAC AACAGAAACA 
CTGTCGCAAC TGCTGATCGG CGCGGGCCTT GTGAGCGGGT TCCTGGGCGG TGGCGCGTTG 
TTGTTGATGG GGCTTGGCAC CGGTATCCGC ATACTCGGCC ACTATGCGCG GCTGCATTTT 
CGCCTGGCTC AATTAAGCCC GGATCACGCT TGA
 
Protein sequence
MTKDAFLRML RLGLAGLPAQ EVDDIVADYQ AHFAESAASG RSEQEVAAAL GNPARIAREL 
RAEMGLRRFE SHWSLSNMLA AMMALAGLAI VDILFLLPLL TVAFFTVFGL GIAVTAIGAA 
GVKIIITTML FQFDGPTTET LSQLLIGAGL VSGFLGGGAL LLMGLGTGIR ILGHYARLHF 
RLAQLSPDHA