Gene Avi_4286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4286 
Symbol 
ID7386530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp3601806 
End bp3602438 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content59% 
IMG OID643652945 
Productacetyltransferase 
Protein accessionYP_002551117 
Protein GI222150160 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.537934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGCT TATTACTGAG GGATGACCAA TTACGGTCAC CCGACGATCG GTTGAGGCCG 
GATCGGTTAA GGCAAAGTTG CCCTGTCCTC TTATCGCAGC GGCTGGTTAT GCGCGCTCCG 
CATGTAGAAG ACATTGACGC CCTTACCCAT CTCGCCAATA ACGCCGCCGT TGCGACCATG 
GTGTCGCGCA TGCCACATCC TTACACGGCA GCCGATGCCG CCGATTTTGT GCGACGTTCC 
AATCTCGGCG AGATCGGTAA ATGCGTCTAT GCGATTACAA AAGGCGAAAA CGGCGAATTT 
CTCGGGTGCT GCGCGCTCGA GCCGCACACC GACCTGGAGA CGCTTGAAAT CGGCTATTGG 
CTGGGCGAAC CCTATTGGAA CAACGGCTAT GCGACGGAAG CCGCCCATGC CCTGATCGAT 
ATGGCCTTCC GGACCCGTGA CATCGCCTTT ATCGATGCCC GTTGCCGCGT CACCAATGTG 
GCTGCGCGCC GCGTTATCCA GAAATGCGGT TTTCAGTTCC AGGGCTCCGG CATGGTCGGC 
CATCTGGCTG CCCGTGGCAT GGTGCCGGTG GAATGGTACC GGCTGGATCG CAAGACCTGG 
ATGTCGCTGA AGAGCTGGGG GGAGATGCGG TGA
 
Protein sequence
MERLLLRDDQ LRSPDDRLRP DRLRQSCPVL LSQRLVMRAP HVEDIDALTH LANNAAVATM 
VSRMPHPYTA ADAADFVRRS NLGEIGKCVY AITKGENGEF LGCCALEPHT DLETLEIGYW 
LGEPYWNNGY ATEAAHALID MAFRTRDIAF IDARCRVTNV AARRVIQKCG FQFQGSGMVG 
HLAARGMVPV EWYRLDRKTW MSLKSWGEMR