Gene Avi_4231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4231 
Symbol 
ID7386985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3557221 
End bp3558129 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content55% 
IMG OID643652903 
Productnucleotidyltransferase 
Protein accessionYP_002551076 
Protein GI222150119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00450243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAGG ACCGGCTCAA TCATCTGCCC GCCCGCAAGC AGCGCGAGCT GGAGCGGGTG 
GTCCGCATTC TCTTCGACGA GTTCGAAGCC GCGCAAAAGG GCAGGCTGTC CGATAAAAAC
AAGGGCGGCC GTATCCTCAA GCTGATCCTG TTCGGCTCCT ATGCGCGTGG CGACTGGGTC
GAGGACCATG CGAGCGGCTA TTATTCCGAT TATGATCTGC TGGTGGTGGT GAATAGTGAG
ACTTTCGCCG ATGAGGATGA GTTCTGGCGC GGCGCGCAGG AATATCTGAT CCGGGAGGAA
ATCGCTACCA AGCGCTTGAA AACCCCTGTC AATTTTATCG TTCACTCCCT TGATGATATG
AACAATCGAC TGGCCCGAGG CCTGCCTTTC TTCATCGATA TCGCCCGTGA CGGCATCCCG
CTTTATGAAG CGCCGGGCTT TCCGCTCGCT ACGGCCCAGC CGCTGCCTCC AGAGGAGAGG
CAGGCTCAGG CGAAGACTTA TTTCGAGGAT TGGTTTTCGA GTGCCGACGC CTTTCAGGCC
GCAGCCGGAT TTTTGATTGA GCGCGGTAAT TTTAATGAAG CCGCCTTCCA GCTTCATCAA
ACGGTTGAAC GGCTTTACCA CTGCGTTCTG CTGGTGCTGA CGCTCTATAG CCCCCGGTTG
CACAATTTAA GAAAATTGCG ACCGCTGGCC GAAAGTTTGG ATACTCGTCT GATCGATGCA
TGGCCGAGGA AAAACCGCCT TGCCCGTCGT TGTTTCGATC GCCTGCACCG CGCCTATGTC
GAAGCCCGTT ATTCATCAAA ATACGAGATT ACCGCCGAGG AATTGGCGTG GCTGGTGGAG
CATATCAAAC AGTTGCAGGA TGCTGTCGAA CTGGTCTGCA AGGAGTGGCT GGAGAACCAC
GATCTATAG
 
Protein sequence
MDQDRLNHLP ARKQRELERV VRILFDEFEA AQKGRLSDKN KGGRILKLIL FGSYARGDWV 
EDHASGYYSD YDLLVVVNSE TFADEDEFWR GAQEYLIREE IATKRLKTPV NFIVHSLDDM
NNRLARGLPF FIDIARDGIP LYEAPGFPLA TAQPLPPEER QAQAKTYFED WFSSADAFQA
AAGFLIERGN FNEAAFQLHQ TVERLYHCVL LVLTLYSPRL HNLRKLRPLA ESLDTRLIDA
WPRKNRLARR CFDRLHRAYV EARYSSKYEI TAEELAWLVE HIKQLQDAVE LVCKEWLENH
DL