| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4213 |
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| Symbol | |
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| ID | 7386974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3544867 |
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| End bp | 3546279 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652892 |
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| Product | integral membrane protein |
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| Protein accession | YP_002551065 |
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| Protein GI | 222150108 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0397228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACCA TCACATCCCT GCCGGTCGAA AAGCCGGTAG CAGCCTCGAC CCGAGGATTT
TATTTTGCCG CCTGGCGCTG GCATTTCTAT GCAGGGCTCT ATGTCGCCCC TTTCCTGATT
GTGCTGGCCG TGACCGGGCT GATCATGATG TGGAGCGCCA CCCTGGTCGG ACGCGACGGA
GAAAAGGCTT TCACCGTCAC CCCCACATCT GCCCAGACGC TTGTGTCGCA ACAGGCAGAT
GCCGCACTGT CCGCCATTCC GGGAGGGGTT ATCGCTCAAT ATATCGCGCC AGCCACACCA
GAAAGTGTGG CGGTTTTCCG GGTTAACCGG GGCCAAGAGT CGATGATGGT CGCCATCAAT
CCTTATGACG CGCAAGTGCT GGGTCAATGG AGCCGCCGCA CCGCGCTCTA CGACCTGGCC
GAAAGCATTC ACGGCGACCT GCTGATTGGC ACACTCGGCG ACAGGCTGAT CGAAATCGCC
GCCGGGTTCG GCGTGGTGCT GATCATCACC GGGCTTTACA TGTGGTGGCC GCGTCAAGGC
GAGAGCTATT TGCGACTGCT CATTCCAAGC TTTGCCGAAA AGGGTCGCCA GCTGTGGAAA
TCCCTGCACC GCACCATAGG CTTTTACGCC TCGATCCTGC TTCTGGTCTT TCTGGTCTCG
GGTTTGAGTT GGGCAGGCAT CTGGGGGGAA AAATTCACTC AGGCCTGGAG CACCTTCCCG
ATTGGCAAAT GGAGCGATGC TCCATTATCC GATGCGACCC ATGCCACCAT GAACCATGGC
AGTATCAAGG ATGTTCCCTG GACGCTGGAA CAGGCCCCCA TGCCGATGTC CGGCTCCGCC
GCCGGTCATG CCGGCCTGCC GGGTGGACAG ACGGTGACGC TGGACAATGT CATCGCCTTT
GCCCGCGCCA TCGGCTTCGA TCACCGCTTC CAGCTGAATT TCCCCAAGGA CGAAACCGGC
GTCTGGAGTA TTTCGCGCGA TACGATGAGC AATGACAGCA CCAACCCGCT GTTGGACCGC
ACCGTGCATA TCGACCGCTA TAGCGGCAAG GTGCTGGCCG ATATCAAATA TGAAAACTAT
GGTCTGGCTG GCAAGGCCAT GGCCGTGGGC GTTTCCTTTC ACATGGGTAC GATTGGCCTG
TGGAATCTGG CACTGGTCAC CGTTTACTGT CTGGCGGTGA TTTTCCTCAG CGTCAGCGGC
ATCGTTATGT GGTGGATACG CCGTCCGAAA GGCGCGTCAC GGCTGATGGC GCCCGCCTAT
CCATCCGACA TGCGCCTCTG GAAAACCGGA GCGATCGTCA TGCTGCTCAC CTCCCTGCTG
TTTCCGCTGA CGGGCGCGGC GCTGCTGGCT GTCATCCTGC TCGATATGGT GCTGATCCGC
CGGATCAGGC CGTTGAAAAG GGCATTGAGC TAA
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| Protein sequence | MSTITSLPVE KPVAASTRGF YFAAWRWHFY AGLYVAPFLI VLAVTGLIMM WSATLVGRDG
EKAFTVTPTS AQTLVSQQAD AALSAIPGGV IAQYIAPATP ESVAVFRVNR GQESMMVAIN
PYDAQVLGQW SRRTALYDLA ESIHGDLLIG TLGDRLIEIA AGFGVVLIIT GLYMWWPRQG
ESYLRLLIPS FAEKGRQLWK SLHRTIGFYA SILLLVFLVS GLSWAGIWGE KFTQAWSTFP
IGKWSDAPLS DATHATMNHG SIKDVPWTLE QAPMPMSGSA AGHAGLPGGQ TVTLDNVIAF
ARAIGFDHRF QLNFPKDETG VWSISRDTMS NDSTNPLLDR TVHIDRYSGK VLADIKYENY
GLAGKAMAVG VSFHMGTIGL WNLALVTVYC LAVIFLSVSG IVMWWIRRPK GASRLMAPAY
PSDMRLWKTG AIVMLLTSLL FPLTGAALLA VILLDMVLIR RIRPLKRALS
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