| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4205 |
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| Symbol | rpsP |
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| ID | 7386968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3540670 |
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| End bp | 3541041 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652886 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_002551059 |
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| Protein GI | 222150102 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.847506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCTCA AGATTCGTCT CGCCCGTGGC GGTTCCAAGA AGCGTCCTTA CTACCAGATC
GTCATCGCCG ACGCCCGCAG CCCGCGCGAT GGCCGTTTCC TGGAAAAGGT TGGTTCCTGG
AACCCGATGC TCGGCAAGGA CAATGAAAAG CGCGTTGAAC TGAACGCCGA CCGTATCAAG
GAATGGATTG CCAAGGGCGC ACAGCCGACC GACCGCGTTC TGAAGTTCCT CGCAGAAGCT
GGCCTGGCTG AACGCGCTGC ACGCAGCAAC CCTGAAAAGG CAAAGCCCGG CAAGCGCGCT
GTCGAGCGTC TGGCTGAAAA GAAGCAGAAG GCTGATGCCC TGGCTGCTGC AACTGCCGAA
GCCGCTGAAT AA
|
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| Protein sequence | MSLKIRLARG GSKKRPYYQI VIADARSPRD GRFLEKVGSW NPMLGKDNEK RVELNADRIK
EWIAKGAQPT DRVLKFLAEA GLAERAARSN PEKAKPGKRA VERLAEKKQK ADALAAATAE
AAE
|
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