| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4181 |
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| Symbol | |
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| ID | 7386948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3519758 |
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| End bp | 3522304 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652866 |
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| Product | hypothetical protein |
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| Protein accession | YP_002551039 |
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| Protein GI | 222150082 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.821525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAT TTTTGCAACG TCTCAGAACC GCCTTGCGTC TCAGCGCCCG CGAAATGCGC
GGCGGGTTTG GCGGATTTTA TATTTTCCTG GCCTGCATTG CCCTCGGCAC GGCAGCGATT
GCCGCCGTCA ATTCCGTCTC CACATCGATT ACCCGGTCCA TCGCCAGCCA GGGGCAATCG
CTTTTGGGCG GCGACATCCG GTTTGAGCTG AACAACCGGG AGGCCAATGT GGCGGAGAGT
GCCTTCCTAA AGGGGCTCGG CACCGTCTCT ACCTCCACCG GCCTGCGCTC CATGGCCCGA
TTGCCGGATG GGTCCGATCA GTCTCTGGCG GAAATCAAGG CTGTCGATAG TGCCTATCCG
CTCTATGGTA CTTTCGTCTC CACGCCGGAC CAGCCCTTGG CTGACCTATT GACAAAAACC
GGTGACGCTT ATGGCGCAGT GGCAGCCCCT TTGTTGCTCG ATCGGCTGGG GATAAAGATC
GGCGATAGCC TGCTGGTCGG CTCCGTCCGG CTGGTGATCA CCGGCACCAT CACCACCGAG
CCGGATGCCA TTTCCGAAGG CTTCGGCTTT GCGCCGCGCA TCATCACCAG CCGCGAAGCG
CTTACCGCCT CCGGCTTGAT CCAGACCGGT AGCCTTGTAG AACAGGTCTA CAAACTCAAG
CTGAACCCTG GCAGTCCGTC GCTCGCGGCC ATTCAGGATC AGGCCAAGCA GCAATTTCCC
GATGCGGGCT GGTCGATCCG CACCAGCGAC CGGGCAGCCC CCAATCTGAC CGAAAATATC
ACCCGGTTTT CGCAATTCCT GACACTTGTC GGGCTGACGG CGTTGATCGT TGGCGGTGTC
GGCGTCGCCA ATGCGGTGCG CGCCTTTCTC GACAGTAAAC GCAGCGTCAT TGCCACGCTG
AAATGCCTGG GCGCACCGGC TTCCGTCGTC GTCATGGTCT ATCTGTTCCA GATCCTGATG
GTCGCCAGCA TCGGCATTGC GCTGGGCCTT GCCATTGGTG CCATCGCCCC CTGGATTGCC
AGCTATTATC TCGCGCAATT CCTGCCGATC CAGGCGGATT TCGCCATTTA CCCACGCTCG
CTGCTGCTGG CCCTGCTGTT TGGTGGGCTG ACCACGCTGG CTTTTGCCGT CATGCCGCTC
GGCCACGCGC GGCAAGTGCC AACCACGGCG CTGTTTCGCG AGCAAGGCTT CGAGACCCGC
CGCCTGCCCT CCTGGCCTTA CGTGCTGGTG GCGGGGCTGG CGATCCTCGC CCTTGCCGCA
CTAGCGATCC TGACCGCCTA TGACCGGCGT CTGGCGATAT TCTTCCTGAT TGCCATGGCC
GCCAGCTTCG TGGTGCTGCG GCTGGTCGCT TACGGTGTCG CAGCCCTTGC CCGGAAAAGC
CCTCGGCTTC CCTCGCCTGC GCTGCGGCTG GCGGTCGGCA ATATCCATCG GCCCGGGGCG
CTGACGCCCT CGGTCATTCT GTCGCTTGGC CTTGGCTTAG CACTTCTGGT GACACTGTCG
ATGATCGACG GCAATCTGCG GCGCAATCTC ACGGGTGCGC TCTCTGAAAA AGCCCCGAAT
TTCTTCTTTG TCGATATCCA GCGCGACCAG CTCGACAGTT TCCGCCAGAT CATTGCCCGC
GAGGCACCGC AGGGACAGGT TGTTGAAGTG CCGATGTTGC GCGGACGAAT CACCGCTTTC
AATGGTCAGG ACGTTGCCAA GATGAACGTG CCGCCGCAGG GCCGATGGGT CCTGCGCGGC
GACCGGGGTA TTACCTATGC CACCGACTTG CCGAAAAATG CCACAGTGAC GGAGGGGCAA
TGGTGGACAC CGGATTACAA GGGTGAACCG CTGGTGTCTT TCTCAGCCCA AGAAGCCGGC
GAACTGGGCC TGAAGCTGGG TGATACAGTA ACGGTCAATG TGCTGGGCCG CACCATCACC
GCGAAAATCG CCAATTTCCG CAAGGTGGAT TGGCAATCCC TGTCGATCAA TTTTGTCATG
GTGTTTTCGC CCAATACCTT TGCCGGTGCA CCCCATGCCT GGATCGCCAC CCTGACCGAG
CCATCGGCCA GCCCGCAGCA GGAGGCCAGC ATCCTGCGCG CTGTCACCAA GGCCTATCCC
ACGATTACCA GCGTCCGGGT GAAGGATGCG CTGGACATGG TCAATTCGCT GGTTGGCCAG
TTGGCCGTCG CCATCCGGGC CGCCGCCGCC ATCGCCCTGA TTTCCTCCGT TCTGGTGCTG
TCGGGTGCGC TTGCGGCAGG CAATCGGGGT CGCACCCATG ATGCGGTGGT GCTGAAAACG
CTTGGGGCGA CCCGCCCGAT GCTGATCCGC GCCTTTACCT ACGAATATCT GCTGCTTGGC
CTTGCCACGG CGATTTTCGC GCTGCTGGCC GGAAGCGTTG CGGGTTGGTA TGTGGTCAGC
CAGATCATGA AACTGCCCGC CAGCTTCCTT CCCGGGGTCG CCGTTTCCAC CGTCGCGCTG
GCGCTGGTGA CGACGATCGG CATCGGTCTT GCCGGAACAT GGCGGGTTCT GGGGCAGAAG
GCAGCGCCGG TTCTGCGGGA ACTCTGA
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| Protein sequence | MSGFLQRLRT ALRLSAREMR GGFGGFYIFL ACIALGTAAI AAVNSVSTSI TRSIASQGQS
LLGGDIRFEL NNREANVAES AFLKGLGTVS TSTGLRSMAR LPDGSDQSLA EIKAVDSAYP
LYGTFVSTPD QPLADLLTKT GDAYGAVAAP LLLDRLGIKI GDSLLVGSVR LVITGTITTE
PDAISEGFGF APRIITSREA LTASGLIQTG SLVEQVYKLK LNPGSPSLAA IQDQAKQQFP
DAGWSIRTSD RAAPNLTENI TRFSQFLTLV GLTALIVGGV GVANAVRAFL DSKRSVIATL
KCLGAPASVV VMVYLFQILM VASIGIALGL AIGAIAPWIA SYYLAQFLPI QADFAIYPRS
LLLALLFGGL TTLAFAVMPL GHARQVPTTA LFREQGFETR RLPSWPYVLV AGLAILALAA
LAILTAYDRR LAIFFLIAMA ASFVVLRLVA YGVAALARKS PRLPSPALRL AVGNIHRPGA
LTPSVILSLG LGLALLVTLS MIDGNLRRNL TGALSEKAPN FFFVDIQRDQ LDSFRQIIAR
EAPQGQVVEV PMLRGRITAF NGQDVAKMNV PPQGRWVLRG DRGITYATDL PKNATVTEGQ
WWTPDYKGEP LVSFSAQEAG ELGLKLGDTV TVNVLGRTIT AKIANFRKVD WQSLSINFVM
VFSPNTFAGA PHAWIATLTE PSASPQQEAS ILRAVTKAYP TITSVRVKDA LDMVNSLVGQ
LAVAIRAAAA IALISSVLVL SGALAAGNRG RTHDAVVLKT LGATRPMLIR AFTYEYLLLG
LATAIFALLA GSVAGWYVVS QIMKLPASFL PGVAVSTVAL ALVTTIGIGL AGTWRVLGQK
AAPVLREL
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