| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4157 |
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| Symbol | |
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| ID | 7386933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3504613 |
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| End bp | 3506193 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652851 |
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| Product | secreted alkaline phosphatase protein |
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| Protein accession | YP_002551024 |
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| Protein GI | 222150067 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0120038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACAT CCTTCAAGGC GCTGAGCCGC CGTTCGTTTC TGCTCGGCAC CAGTGCTGCC
GGGCTTGCTG CCGGGTCCGG TCTGGCGCTC CCGTTTTATG CCCGGGCGGC GGACCGCCCC
GTTTTCACCC ACGGTGTCCA ATCCGGCGAT GTCGATCTGA ATTCCGGGAT GATCTGGACG
CGGGTAGACC GCCCTTCGCG GATCATGATG GAATATTCCA CCACCGAAAG CTTTGCCAAT
CCGGTGCGGT TGCCTGCCCT CAATGCGCTG CCGGATAGTG ACTATGCGGT GAAGCGGCTT
TTGGCGGACC TCCCGTCCGA TCAGGAGATT TTCTATCGGT TCACGGCGGC TGATCTTTCC
CATATCAACA GTGTCTCGGA ACCGATCATC GGCCGGTTCC GCACAGCGCC CGCTTCCCGG
CGTGATGTCC GCTTCGTCTG GTCGGGTGAC ACGGTGGGCC AGGGCTGGGG CATCGATGAA
ACCGGCATGA AGACCTATGC CACGATGGCC AAGCATCAGC CGGATTTCTT TCTGCATTCC
GGCGACACCA TCTATGCCGA TGGTCCCCTC AAGGAAGAGG TCGATCTGAA GGACGGCACC
AAATGGAAAA ATGTCGTGGT CACCGATGAA AAGCGCAAGG TGGCAGAAAC GCTGGACGAA
TATCGCGGCC AGTGGAAATA CAATATGATG GACAAGAACG TGCTGGAGCT GTCGGCTATT
TGTCCGACCC ATTACCAGTG GGACGATCAC GAAGTTCTGA ACAACTGGTC CTCAGGCAAG
GATTTGACAG CCGACAGCCG CTATAGCGAA AAATCCATCG CTCTTCTGTC GGCGCGTGCC
GCCCGTGCCT TCCATGAAAT GACGCCGATC CGCTACACGC CTGCCGAGCC GGGCCGGGTT
TATCGCAAGA TTTCCCACGG TCCGCTGGTC GATGTGTTTT TCCTCGATAT GCGTAGCTAT
CGTGGTTCCA ATCACGACGG CATGGAAACG GTCCAGACGC CGGAATCGCG CATCCTCGGG
GCCGAGCAAG TGGCCTGGCT GAAGCGGGAG CTGACCAATT CCAAGGCAAC CTGGAAAATC
ATCGCCGCCG ACATGCCTTT GGGCCTGATC GTCTGGGACG ACTTTCTCAA CAAGAAAGGC
ACGGAAGCCG TGGCCCAGGG CCATAATGGC GAGCCGCGTG GCCGTGAGCT GGAAATTGCC
GAACTGCTGC GGCATATGAA GATGACAGGC ATCCGCAACA CCGTCTGGCT GACAGCGGAT
GTGCATTATA CCGCTGCCCA TTACTACAAT CCTGACAAGG CGGCTTTCCA GGATTTTGAC
CCGTTCTGGG AGTTTGTCTC CGGTCCTCTG CATGCAGGCA CGTTCGGGCC CAGTGATCTG
GACATGACCT TCGGGCCGGA GCTGAAATTC GTCAAGGCAC CGACGGCGGA GCAGGGCCAG
AACCTGCCGC CGTCAGCAGG GCTTCAGTTC TTCGGCATCG TCGATGTCGA TGGCGTGAGC
GAACAGCTCA GCGTGCGGCT GATGGACCGG GACGATAATG AGCTTTACAA GGTCGTGCTC
GATCCGGTGC GCAGCGCCTG A
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| Protein sequence | MSTSFKALSR RSFLLGTSAA GLAAGSGLAL PFYARAADRP VFTHGVQSGD VDLNSGMIWT
RVDRPSRIMM EYSTTESFAN PVRLPALNAL PDSDYAVKRL LADLPSDQEI FYRFTAADLS
HINSVSEPII GRFRTAPASR RDVRFVWSGD TVGQGWGIDE TGMKTYATMA KHQPDFFLHS
GDTIYADGPL KEEVDLKDGT KWKNVVVTDE KRKVAETLDE YRGQWKYNMM DKNVLELSAI
CPTHYQWDDH EVLNNWSSGK DLTADSRYSE KSIALLSARA ARAFHEMTPI RYTPAEPGRV
YRKISHGPLV DVFFLDMRSY RGSNHDGMET VQTPESRILG AEQVAWLKRE LTNSKATWKI
IAADMPLGLI VWDDFLNKKG TEAVAQGHNG EPRGRELEIA ELLRHMKMTG IRNTVWLTAD
VHYTAAHYYN PDKAAFQDFD PFWEFVSGPL HAGTFGPSDL DMTFGPELKF VKAPTAEQGQ
NLPPSAGLQF FGIVDVDGVS EQLSVRLMDR DDNELYKVVL DPVRSA
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