| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4153 |
|---|
| Symbol | |
|---|
| ID | 7386929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 3500881 |
|---|
| End bp | 3501195 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643652847 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002551020 |
|---|
| Protein GI | 222150063 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1872] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00251] conserved hypothetical protein TIGR00251 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCATT GCTATCGGCG TTTCGATGAT CACATTCGCC TTGCCGTCCG GCTGACGCCG
AATGGCGGAC GTGACGGCAT TGATGGCGTA GACGTCAATG CGAATGGCGA AGCCCACTTG
AAAGTGCGGG TCAGCGACGT GCCGGAAAAG GGGCGTGCCA ACAAGGCATT GATCGCCCTT
CTGGCCAAGC GCCTCGGCGT GGCTAAATCC GCCGTCAGCC TGATATCAGG AGATGCCGCC
AGACAAAAAA TCCTCCGGAT CGATGGCGAC CCGGAGGATT TGATTGGTAG GCTGGAAACG
ATCACTGCCG AATGA
|
|---|
| Protein sequence | MSHCYRRFDD HIRLAVRLTP NGGRDGIDGV DVNANGEAHL KVRVSDVPEK GRANKALIAL
LAKRLGVAKS AVSLISGDAA RQKILRIDGD PEDLIGRLET ITAE
|
|---|
| |