| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4146 |
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| Symbol | |
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| ID | 7386922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3494159 |
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| End bp | 3494875 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652840 |
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| Product | uroporphyrinogen-III synthase |
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| Protein accession | YP_002551013 |
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| Protein GI | 222150056 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.373106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTTC TGCTGACCCG GACCGAGACC GCAAGCCGCA AAACGGCAGA CCGTCTCCGC
GCCCTGGGTC ACGAACCCGT GGTTCTGCCG CTGGCCCACG CCATACACCA CGTCGATGAT
ACACTTTCTG CCCTCTCCCA ACCGCATGCA GCCCTGGCAG TCACCAGCAG CGAGGCGATC
AGAAGCCTCG CATCTCATCG CGAGGCGCTT CGGGGCCATT TCGAAACCCC GCTGTTTGCC
GTGGGTAAGG CGAGCGCCAG CACCGCACGA GCGCTTGGTT TTCGCAAGGT TCTGAGCGCC
CGAGGCGATG GCGCCGCCTT GGCTGAACAG ATTGCCGCCG CCCCAATCGC CTGGGCAAAT
CCCCTGCTTT ATCTGGCCGG GCAGCCCCGC AAGCAGAGCC TGGAACACGG GCTGCGCCAG
TCCTCCATTA CCTTTCGCGT TGTGGACTCC TATACTATGC AGGGACTGAC TTATCATGAG
GGCGACATCT GTGCCCGGCT CGAGCAAAAG GCGGTGGACG CTGTGCTGCT ATATTCAGCC
GAGACCGCCA GACGGTTTTT TGCCCTGCCT CTTTCCGGTA AAGCCGCCGG TCTTTTCGCA
TCCGCACACA TTTTCTGCCT AAGCGCCGAC ATTGCCGAAA ACGTGGCAAA ACCGTTCAGG
AACAGGGTAT CCATTGCCCC TCAGCCTCGT GAGGACGATC TGCTTTCTCT CCTGTAA
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| Protein sequence | MRVLLTRTET ASRKTADRLR ALGHEPVVLP LAHAIHHVDD TLSALSQPHA ALAVTSSEAI
RSLASHREAL RGHFETPLFA VGKASASTAR ALGFRKVLSA RGDGAALAEQ IAAAPIAWAN
PLLYLAGQPR KQSLEHGLRQ SSITFRVVDS YTMQGLTYHE GDICARLEQK AVDAVLLYSA
ETARRFFALP LSGKAAGLFA SAHIFCLSAD IAENVAKPFR NRVSIAPQPR EDDLLSLL
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