| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4103 |
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| Symbol | mdh |
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| ID | 7388899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3457595 |
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| End bp | 3458527 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652807 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_002550980 |
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| Protein GI | 222150023 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0352919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGTCG GCATAGTGGG AGCGGGCATG GTGGGCAGTG CATCGGCCTA TGCATTAACA
ATGCTTGGCA TCGCCTCGGA AATCGTGCTG GTTGATTATA ATACGGATCT GGCCCAAGCC
CAGGCCGAGG ACATATCCCA TGCCGTGCCA TTCGTTTCAG CAACCCTTGT ACGAGCCGGA
GATTATGGTG ATTTCGCTGG AGCGGGCGTG GTTATCATCT CGGCAGGTGT CAGCCAGAAA
CGGGGTGAAA CCCGGCTCGA ATTGCTTGGC CGCAATGCGG AAGTATTCCG GCAGGTCGTG
GACCAGGTTC TCGCAGCAGC ACCGAATGCA ATTTTGCTGA TCGCTTCCAA TCCTGTCGAT
ATCATGACCG ATATCGCGAC CCGGTTGTCG GGCCTTGCGC CACAAAGAGT GATCGGCTCC
GGCACCATAC TCGATACCGC ACGGTTTCGC AGCTTGCTCG GGCGATATCT GGAGATTTCG
CCGCAATCCG TCCATGCCTA TGTTCTGGGC GAGCATGGCG ATAGCGAAGT GTTGGCCTGG
TCGAATGCAA TGGTTGGCGC CGTGCCATTG ATGTCTTTTG CCAAGCAGGC GGGCAAGCCG
GTGACAGACA CGGTTCGCAG CGAGATCGAC GCCGGTGTGC GCCATGCCGC CGACAAGATT
ATCAAGGGAA AAGGTGCCAC CTATTACGGC ATCGGTGCCG GTCTGGCACG GATCGTCAAA
GCGATTGCCA GCGATCAGCG TGATGTGCTT TCCGTTTCCA GCGTCACAGC GGAGCTGGCA
GGGGTCACGA ATGTTGCTGC GTCCGTGCCA CGGGTGATTG GCTCGAGCGG AATTCTGATG
GATCTTGTGC CTGATCTTGA TGAAACAGAG CGGATTGCCT TGGCAAAGAG CGCAAGGATG
CTGAAGGATC TCGCGCTGTC TGTGCCATGT TGA
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| Protein sequence | MKVGIVGAGM VGSASAYALT MLGIASEIVL VDYNTDLAQA QAEDISHAVP FVSATLVRAG
DYGDFAGAGV VIISAGVSQK RGETRLELLG RNAEVFRQVV DQVLAAAPNA ILLIASNPVD
IMTDIATRLS GLAPQRVIGS GTILDTARFR SLLGRYLEIS PQSVHAYVLG EHGDSEVLAW
SNAMVGAVPL MSFAKQAGKP VTDTVRSEID AGVRHAADKI IKGKGATYYG IGAGLARIVK
AIASDQRDVL SVSSVTAELA GVTNVAASVP RVIGSSGILM DLVPDLDETE RIALAKSARM
LKDLALSVPC
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