Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4102 |
Symbol | |
ID | 7388898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3457150 |
End bp | 3457422 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643652806 |
Product | transcriptional regulator ArsR family |
Protein accession | YP_002550979 |
Protein GI | 222150022 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00250446 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGTCCCATG AAAACCGGCT GTTGATTCTG TGTATTCTCA GCGAAGGGGA AAAGACGGTT GGCGAGCTGG AAGTGCTTCT GCAATTGCAG CAGGCCATTG TGTCACAGCA ACTGGCACGG TTGCGGATGG ACAATCTGGT GGAAAGCCGC CGGTCCGGGC GCCAGATTTA TTATTCGATC ACCAATCCGG CGGTGAAGGA ACTGGTATCG GTGCTGTACC AGATGTATTG TTCACCTGCG GGCGAGGAGA CGACATTCGA CCTGCGTGAT TGA
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Protein sequence | MSHENRLLIL CILSEGEKTV GELEVLLQLQ QAIVSQQLAR LRMDNLVESR RSGRQIYYSI TNPAVKELVS VLYQMYCSPA GEETTFDLRD
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